Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6110g00002 ATGATTGGAGGCAAAGATCTTGTTCCCAATGGCGTTAACTCTGAGGTGGAGAACTCAAGAAGCACGGTGCAACAGAAGCATCATGATATCGTTCATGGCAAGGAACACTCACAAGAGAAAAACCCAGAGAAGAAGGTTGGTGTTAATGAGTTTCAGTCAACACCCACAAAACTTGGCACTTCTGGGCTGCAAGAGTTGACCCTCAGCTACCTCTGTGACAACCCAAAATTGGGTCTTGTTGAGAGAGAGGTTGGTGATAGAAGCTTGGTGAAGGGCAAAGAAATTGTAGTTTTTGGGAATTCAGATCAAGATGAGAAACACCAGTTGTGTTTGAATCTATCAGAAGGGACTAGTCTGTCAGAACGCGATGAATTAAGGTTTGAATTCTCGTTGGGTGGTGTCAAACAATGTCTCGAACAGGATTACCTTCGAAGGAGGATACCTATTGGAAACCAAAATAAAGATCAAGATGAGAAATGGATAGAGAGGGATTTCTTGAGTTTGAGTGAAAGTAGGGAGAATTCTTCAAAGAGATCCATTGAGGAAGAGTGTGAGAGGGAGAAGAATAGTGACAACAAAAAGCAGAAGCTTGAGACTCTTAGTCTATCTCTTGCTTTGCCTGATGTTTCAATCTCTCTCACAGCCTCAAATGCTATGCAAAATGGTGACCAACTTGTTAGGCCAAAACCTAGTAAGCCATCCACAAGGACCACAACTACCGTCAATTCGTGTTCAAATGATTACACAGCAGCTTCTTTGTCTCATTCTTGCTCTCACCCTTTCTCACACAACCCAAGTTGCTCACGTACCCGAAATTCGACTGAGAATTTTGAGTATTCAGTTAGCAAAGATGATCAAATTTGGCATTGTGGGGAGGGGACTAATGGGTCGGTTCATAGCAGGTTCAAGCCAATAGGAGATGGGGTTGCTTTGGCCAACCATTCCTTTATGCAAGGGAATAGTCAGTATAAGGCTACTAGCTCAGATAACCAATCTTTTTACCCTTCAGAATTGCCTGCAAGAGTGAGATTTGAAGCTCCGTCAGAGGGCTCAAGGGGAAAGAATTCTGAGAACCTGAGAGGCTTGGAAGGTGTGGATGGTGAGAAGGTGATGAAGTTTTCTACATCATCAGAGAGAGTTCTAAGAGAAATTGTGACTGAGTCTGTCCCAGCCATGGCATTGACATTTCAGGAGTTCACAGATGAAGCCATAACATCAATCAAGGAACACTTGAAAGGTCTCATTGAAATGCCAGAGAAGAAAGTGGAATTGCTGAGCCTGCAGACCCGGCTCGGCCAAAGATCTGACCTCACAAGAGAGACTCTTTCAAAGTGTCATAAGGAGCAACTACAGATTTTGGTAGCTATCAAGATGGGACTTGGGAGTGTGTTGTCTGGTCAGTTCCAGTTTGTGGAGATGGTGGAGGTTTTCTTGTATATGAGATGCCGAAATGTAAACTGCAAGAACTTATTACCTGTTGATGACTGTGAGTGCAAGATGTGCTCAGGAAGTAAGGGGTTTTGCAGTTCTTGCATGTGTCCTGTTTGTTTGAACTTTGATTGTGCAAGTAACACTTGTAGTTGGGTTGGTTGTGATGTTTGTTTCCACTGGTGTCATGTTGCTTGTGCCATTCAGAGGAATCTAATCAAACCTGGGCCTAGCTTGAAGGGTCCTTCAGGGACCTCTGAGGTGCAGTTTCATTGTACAGGCTGTGGACATGCTTCAGAAATGTTTGGCTTTGTTAAAGATGTTTTTGTTTTTTGTGCCAAGGATTGGGGCCTAGAAACCTTGGTGAAAGAGCTTGACTGTGTGAGGAGGATTTTCCTGGAAAGTGAAGATCGCAAAGGGAAGGAATTGCATATTAAAACGAATGATATGCTGTTAAAGCTTCAATCTAAACTGCTTTCTCCTTTGGATGCCTGCAACTACATCATACAGTTTTTCAGCTTGTTTATCAAGACAATTACATTCAGACAATATGATGTGGATAACATGCCAGAATTTCCTGCTTCTGCTATATCCTCAAAGGACTTGTCAACATCCAAGGCTAAACTTACGGTGGACACAACACCATCTCTTCCACAATCTACTTCTTTAATACCAAAACATTCTCATGACATGAGCTACACTAGGTCACATAACCTTCAACAGAAAGACCTCAAAGCCTCCCTCTTCAGTGAACATAAAAATGAGACTGATTTCCACTTAGATGCTTTATTAAGGAAGGGAGGGCATGAAAGCTTGGAGAGCATCGTGCGGATAAAAGAGGCTGAAGCCAGAATGTTCCAAAGGAAGGCTGATGAGGCAAGGAGAGAGGCAGAGGGATTCCAGAAGATGATCAAGACAAAGACTGCACAGATGGAAGAAGAGGATGCAGAAAGGCTTGGCAAACTTTGCTTGCATGAGACAGAGGAAAGGAGGAAGAGAAAATTTGAGGAACTCAGTGTCTTGCAGAATTCTCATTATGATTACTTCAACATGAAAAGCAGAATGCAAGATGAGATTCATGGTTTGTTGAAGAGAATGGAAGTAACAAAGCAGCAATGGTATTAG 2553 0.4277 MIGGKDLVPNGVNSEVENSRSTVQQKHHDIVHGKEHSQEKNPEKKVGVNEFQSTPTKLGTSGLQELTLSYLCDNPKLGLVEREVGDRSLVKGKEIVVFGNSDQDEKHQLCLNLSEGTSLSERDELRFEFSLGGVKQCLEQDYLRRRIPIGNQNKDQDEKWIERDFLSLSESRENSSKRSIEEECEREKNSDNKKQKLETLSLSLALPDVSISLTASNAMQNGDQLVRPKPSKPSTRTTTTVNSCSNDYTAASLSHSCSHPFSHNPSCSRTRNSTENFEYSVSKDDQIWHCGEGTNGSVHSRFKPIGDGVALANHSFMQGNSQYKATSSDNQSFYPSELPARVRFEAPSEGSRGKNSENLRGLEGVDGEKVMKFSTSSERVLREIVTESVPAMALTFQEFTDEAITSIKEHLKGLIEMPEKKVELLSLQTRLGQRSDLTRETLSKCHKEQLQILVAIKMGLGSVLSGQFQFVEMVEVFLYMRCRNVNCKNLLPVDDCECKMCSGSKGFCSSCMCPVCLNFDCASNTCSWVGCDVCFHWCHVACAIQRNLIKPGPSLKGPSGTSEVQFHCTGCGHASEMFGFVKDVFVFCAKDWGLETLVKELDCVRRIFLESEDRKGKELHIKTNDMLLKLQSKLLSPLDACNYIIQFFSLFIKTITFRQYDVDNMPEFPASAISSKDLSTSKAKLTVDTTPSLPQSTSLIPKHSHDMSYTRSHNLQQKDLKASLFSEHKNETDFHLDALLRKGGHESLESIVRIKEAEARMFQRKADEARREAEGFQKMIKTKTAQMEEEDAERLGKLCLHETEERRKRKFEELSVLQNSHYDYFNMKSRMQDEIHGLLKRMEVTKQQWY 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6110g00002 850 CDD PHD_OBE1_like 512 571 IPR047578 -
Mupr6110g00002 850 MobiDBLite consensus disorder prediction 21 46 - -
Mupr6110g00002 850 Coils Coil 752 786 - -
Mupr6110g00002 850 Coils Coil 800 820 - -
Mupr6110g00002 850 Coils Coil 828 848 - -
Mupr6110g00002 850 Pfam Coiled-coil region of Oberon 713 839 IPR032535 -
Mupr6110g00002 850 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 592 611 IPR004082 -
Mupr6110g00002 850 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 746 766 IPR004082 -
Mupr6110g00002 850 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 519 539 IPR004082 -
Mupr6110g00002 850 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 785 807 IPR004082 -
Mupr6110g00002 850 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 395 417 IPR004082 -
Mupr6110g00002 850 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 473 494 IPR004082 -
Mupr6110g00002 850 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 434 449 IPR004082 -
Mupr6110g00002 850 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 25 849 IPR004082 -
Mupr6110g00002 850 MobiDBLite consensus disorder prediction 1 46 - -
Mupr6110g00002 850 Pfam PHD - plant homeodomain finger protein 482 606 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6110g00002 Mupr-Chr6110 7256 11382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6110g00002 482 579 PHD Gene Family AT5G57380 27.551 4.43e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6110g00002 - - gmx:100816647 1334.32