Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6102g00002 ATGGTATCCAAAAATCCGAACCCGCCCAGAGGATTCTACTTGGATCCGAGTGGCATGGCTCCCTTCGCTTCTGTATCCGCCGCCGCCACGACTTCCGCCACCAACTCGTCGGAGGATGCTGCCAAGAAGATCCGGAAGCCTTACACTATCACCAAGTCACGGGAAAATTGGACCGAACCCGAACACGACAAGTTCCTCGAAGCCCTTCAGCTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTATTGGATCAAAGACTGTTATACAGATACGAAGCCATGCACAGAAGTACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCTCCACCCAGGCCTAAAAGAAAAGCTGCCCATCCATATCCTCAAAAAGCTTCCAAAAATGCTCCTGTGCTCTCACAAGTATCAGGATCTTTTCAATCTTCATCTGCTTTGCTTGAACCTGGATATATCATGAAGAATGATTCTTCACAGATGCTTAAAGCTCCTATTATGAATACTGTGGTGTCGTCTGTGACAAAAGTGAATAATCCTTGCAGTAGTGGTGAAAGCACTCCTAAAGTGCGGCCGGTTGGTGAATCTAATGGTCAAGGGAATAAAAGTCATCCATTGAGAGGCAAGGATTTAGTGGTATATGGCTTCATTGGCAGTGTATTTGACCCAAATGCAACTGAGCATCTGCAGAAACTAAAAAAGATGGACCGTATAGATGTTGAAACAGTGCTACTGTTAATGAGAAACCTGTCTATCAATTTATCTAGCCCAGATTTTGAGGATCATGATCCATCAAGAAGCATATAA 810 0.4407 MVSKNPNPPRGFYLDPSGMAPFASVSAAATTSATNSSEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVSGSFQSSSALLEPGYIMKNDSSQMLKAPIMNTVVSSVTKVNNPCSSGESTPKVRPVGESNGQGNKSHPLRGKDLVVYGFIGSVFDPNATEHLQKLKKMDRIDVETVLLLMRNLSINLSSPDFEDHDPSRSI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6102g00002 269 Gene3D - 56 104 - -
Mupr6102g00002 269 ProSiteProfiles SANT domain profile. 52 103 IPR017884 -
Mupr6102g00002 269 FunFam protein REVEILLE 6 isoform X1 56 104 - -
Mupr6102g00002 269 MobiDBLite consensus disorder prediction 104 136 - -
Mupr6102g00002 269 MobiDBLite consensus disorder prediction 179 204 - -
Mupr6102g00002 269 CDD SANT 56 99 IPR001005 -
Mupr6102g00002 269 NCBIfam myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Mupr6102g00002 269 MobiDBLite consensus disorder prediction 179 207 - -
Mupr6102g00002 269 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Mupr6102g00002 269 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Mupr6102g00002 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Mupr6102g00002 269 PANTHER SWI/SNF COMPLEX-RELATED 26 256 - -
Mupr6102g00002 269 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Mupr6102g00002 269 SMART sant 53 101 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6102g00002 Mupr-Chr6102 7669 13576 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr6102g00002 Myb_DNA-binding 6.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6102g00002 - - gmx:100783949 409.838