Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6100g00001 ATGACGGGGGTGCAAAGGAAAATGGAAGGCCCCAGTGAGATGGGTCTCATTGGGGAAAATTTTGATGCCGGTTTGATGGGGAGGATGAGGGACGATGAGTATGAAAGCCGTTCTGGAAGTGATAACTTTGAAGGCGTATCTGGTGATGATCAGGATGGTGGTGATGATCAGCCACAGAGGAAGAAGAGATACCACAGACACACTCCTCACCAAATTCAAGAGCTTGAGGCTTTCTTCAAGGAGTGTCCTCACCCTGATGAGAAGCAAAGGTTGGATCTAAGTAAGAGGCTTAGCTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAATCGACGAACCCAAATGAAGACCCAGCTGGAGCGGCATGAGAACATAATGCTTAGGCAGGAGAATGATAAGCTCAGAGCTGAGAACAGTTTGATGAAGGATGCGATGTCAAATCCAGTGTGTAACAACTGTGGTGGACCAGCTATTCCCGGCCAAATTTCATTTGAGGAGCACCAGATTAGAATTGAGAATGCTAGACTAAAGGATGAATTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTTGGCAAGCCAATCTCATCATTGACCAATCCCATGGCTCTCCCAACCTCAAATTCTGGTCTAGAACTTGGTATTGGAAGGAACGGGATTGGTGGTTCAAGCACTCTTGGCACTTCCTTGCCAATGGGGCTTGATTTGGGTGATGGAGTGTTGGGCACTCAACCTGCAATGCCTGGGATTAGACCACCATTGGGATTGATGGGAAATGAAGTTCAGTTTGAGAGATCTATGCTTATAGATCTTGCATTGGCTGCTATGGAGGAATTACTAAAGATGACACAGGCAGAGAGCCCTCTTTGGATTAAGAGTTTGGATGGCGAGAAGGAAATGTTTAACCATGAGGAGTATGCAAGGTTGCTTTCTCCTTGTATTGGTCCAAAACCCACTGCTTATGTAACTGAAGCTACAAGAGAAACTGGGATAGTAATCATCAACAGTTTGGCCCTTGTGGAAACTCTGATGGATGCGAATCGATGGGCAGAGATGTTTCCGTCTATGATTGCTAGAGCTGTGAACCTCGATGTTATATCCAATGGCATGGGTGGAACAAGAAATGGTGCTCTACAAGTGATGCATGCTGAGGTTCAATTGCTTTCACCATTAGTCCCCGTTCGTCAAGTAAGATTCCTCCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTATTGAGATTGGTCATGATGCTGCTAACGCACACCCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGGTAACTTGGCTTGAGCATTGGGAGTATGATGAGAGTGTTGTCCACCAACTTTATCGCCCATTGCTTAATTCTGGCGTTGGATTTGGCGCTCATAGATGGATCGCCACCCTCCAGAGGCAGTGTGAATGCTTGGCTATCCTCATGTCCTCTTCCATCTCAAGTGATGATCACACAGCATTGAGCCAAGCTGGTCGGAGAAGCATGTTGAAATTGGCACAGCGCATGACTAGTAACTTCTGTTCCGGGGTTTGTGCTTCGTCGGCTCGCAAGTGGGACAGCCTCCATATAGGGACTCTGGGTGATGACATGAAAGTGATGACTAGGAAAAACGTGGATGACCCTGGTGAGCCTCCCGGCATTGTGCTCAGTGCTGCAACTTCTGTTTGGATGCCAGTGTCACGCCAAAGGCTCTTTGACTTTCTGCGTGATGAACGCCTCAGAAGTGAGTGGGACATCTTGTCCAATGGTGGACCCATGCAGGAGATGGTCCACATCGCCAAAGGACAAGGACATGGAAATTGCGTTTCTCTCCTTCGTGCTAATGCTGTTAATGCGAACGACAATAGCATGCTGATTCTGCAAGAGACATGGATGGATGCGTCATGCTCAGTGGTGGTATATGCACCGGTTGATGTGCAATCGTTGAACGTGGTGATGAGTGGAGGAGATTCTGCATACGTGGCACTCTTGCCTTCAGGCTTTGCCATTCTTCCTGATGGTCACAACAACAGTTGCAATGGGACTTTGCAGAAGGGTGGCGACAATAGTGGTGGAAGCCTTCTCACAGTGGGCTTTCAAATTCTGGTGAATAGTCTTCCAACTGCTAAGCTCACGGTGGAGTCAGTGGATACTGTGAACAACCTCATCTCCTGCACCATTCAGAAGATCAAAGCTGCTCTCAGAGTTGCATGA 2265 0.4751 MTGVQRKMEGPSEMGLIGENFDAGLMGRMRDDEYESRSGSDNFEGVSGDDQDGGDDQPQRKKRYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLSLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLMKDAMSNPVCNNCGGPAIPGQISFEEHQIRIENARLKDELNRICALANKFLGKPISSLTNPMALPTSNSGLELGIGRNGIGGSSTLGTSLPMGLDLGDGVLGTQPAMPGIRPPLGLMGNEVQFERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEMFNHEEYARLLSPCIGPKPTAYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAVNLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFLRFCKQHAEGVWAVVDVSIEIGHDAANAHPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQLYRPLLNSGVGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWDSLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDNSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHNNSCNGTLQKGGDNSGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKAALRVA 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6100g00001 754 CDD homeodomain 60 118 IPR001356 GO:0003677
Mupr6100g00001 754 MobiDBLite consensus disorder prediction 25 39 - -
Mupr6100g00001 754 ProSiteProfiles START domain profile. 261 497 IPR002913 GO:0008289
Mupr6100g00001 754 Coils Coil 112 139 - -
Mupr6100g00001 754 SMART HOX_1 59 122 IPR001356 GO:0003677
Mupr6100g00001 754 SUPERFAMILY Bet v1-like 263 494 - -
Mupr6100g00001 754 Gene3D - 48 134 - -
Mupr6100g00001 754 SUPERFAMILY Bet v1-like 522 748 - -
Mupr6100g00001 754 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
Mupr6100g00001 754 SMART START_1 270 494 IPR002913 GO:0008289
Mupr6100g00001 754 FunFam Homeobox-leucine zipper protein GLABRA 2 270 493 - -
Mupr6100g00001 754 SUPERFAMILY Homeodomain-like 46 118 IPR009057 -
Mupr6100g00001 754 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 57 751 IPR042160 -
Mupr6100g00001 754 MobiDBLite consensus disorder prediction 1 68 - -
Mupr6100g00001 754 Pfam START domain 271 494 IPR002913 GO:0008289
Mupr6100g00001 754 CDD START_ArGLABRA2_like 265 493 - -
Mupr6100g00001 754 Pfam Homeodomain 61 116 IPR001356 GO:0003677
Mupr6100g00001 754 FunFam Homeobox-leucine zipper protein HDG1 47 134 - -
Mupr6100g00001 754 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6100g00001 Mupr-Chr6100 8269 14152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6100g00001 2 751 Homeobox Transcription Factor Family AT3G61150 59.236 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr6100g00001 START 2.4e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6100g00001 K09338 - gmx:100794400 1428.69