Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr60g00011 ATGGAAAACTCATCATCATCGTCATCTTCAAACTGCGTGTACCGAGAGTGTCTTCGGAACCATGCAGCAAGCCTGGGAAGCTACGCCACCGACGGTTGCGGCGAGTTCACGCTGGACGACGTGTCCTCGCCGTCGCTCCAGTGCGCGGCGTGTGGCTGCCACCGCAACTTCCACCGCAAGGTGACGTGTCCGGCGGCGGAGGGGCTAGGTGGGGAGCTGATGGAGTACTCGGGCGGCGGCGGCGGGGAGGGGAGGGTGGAGGCCGGAGGAAGCAAGAAGAGGTTCAGAACGAAGTTCAGCGCTGAGCAGAAGGAGAAGATGCTTGGTTTTGCGGAGAAGTTAGGGTGGAAGCTGCAGCGGAAAGAGGTTGACGACGAGATTGAGAGGTTCTGCAGAAGTGTGGGTGTGAGTAGACAGGCTTGGATTTTTTTACTTGACAAATCAGAGAAGATTTACGTACCATAG 465 0.5742 MENSSSSSSSNCVYRECLRNHAASLGSYATDGCGEFTLDDVSSPSLQCAACGCHRNFHRKVTCPAAEGLGGELMEYSGGGGGEGRVEAGGSKKRFRTKFSAEQKEKMLGFAEKLGWKLQRKEVDDEIERFCRSVGVSRQAWIFLLDKSEKIYVP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr60g00011 154 SUPERFAMILY Homeodomain-like 79 139 IPR009057 -
Mupr60g00011 154 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 14 61 IPR006456 -
Mupr60g00011 154 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 14 60 IPR006456 -
Mupr60g00011 154 NCBIfam homeobox domain, ZF-HD class 92 140 IPR006455 -
Mupr60g00011 154 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 6 140 - -
Mupr60g00011 154 Pfam ZF-HD protein dimerisation region 12 62 IPR006456 -
Mupr60g00011 154 Gene3D - 77 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr60g00011 Mupr-Chr60 41528 42278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr60g00011 14 140 ZF-HD Transcription Factor Family AT4G24660 43.949 3.20e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr60g00011 ZF-HD_dimer 2.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr60g00011 - - gmx:547765 208.764