Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr609g00001 GTTTCAATGAGTAACTCACTACACTTCAAGAATGGTGGTTGTGGGTTCTATGGTGCCATAAATATTTTTCCTTCACCTCCTGTTCTTTCTTCTCTCCTTGGTCCCCTATCTTCGCTGCGTTCAAACACTTTTGGGGTGATGGGTCATGCTGGAGACACAGAATCTGAAAGTTCTGACATACCCTTTCAGACTTTGAACCCCTCAGTCCAACCCCAAGAGGAGAATGAAGAGTGTTTTGGGATTGAGAACATGAGCTTGTCCTTGCAACCTGGTGAGGAAGTTGAAGGTAAAATTAGGCACACTAAGCTTTGTGCTAGAGGACATTGGAGGCCTGCTGAAGATGCCAAACTTAAAGAGCTTGTTGACAAATTAGGACCTCAAAATTGGAACTCAATTGCAGAACATCTTCAAGGAAGATCAGGCAAGAGTTGCAGATTGAGGTGGTTTAATCAGCTAGATCCAAGAATTAACAGAAAGGCTTTCAATGAGGAAGAAGAGGAGAGACTCTTGGCTGCTCACAAAATGTACGGTAACAAATGGGCCATGATTTCTAGACTCTTTCCTGGCAGGACAGATAATGCAGTGAAGAACCATTGGCATGTGATCATGGCTAGGAGGCAAAGGGAGAAGTCATGTGTCTACAGAAGGAGAAAGCCCACATTTCAAACCCTCCCAAAGGATTTGAATTTGACCTTGCCAAAGAATGCAGGCAGTGAATCAACCATCTCAAGCATCATCATTGATGAATCTGCCTCAACAGGCACTAACCTCTCTCTCACTCCCTCCTCAGCCAAACCAATTCCTATGCCTTTTCAAAACCCTTGTCCTGTTCAGAATCACCAAGCCTTTGGTGCACTAATGGGTTTATCTGGAGAAAGCAGGACACCAGCCAGGGATGTAGGTTTTGATAAGTATTTTGGTGCTTGGAAAGGTTCACGTGAGGCTGGACACATAAGAAGGCTCATGGGTGTGGACCAATCCCATTATTCAGATTCAAACTCATCAGAGGTTACAGTATCTGAGTCAGTTGCCACCGACAGGACTATCAATCTCTCAATTTCTGGGGCAAGTAAAAATATGGGTGATAACAAGGCCAACATGTCATTCATTGATTTTCTTGGAGTAGGAGCTACATAG 1137 0.4406 VSMSNSLHFKNGGCGFYGAINIFPSPPVLSSLLGPLSSLRSNTFGVMGHAGDTESESSDIPFQTLNPSVQPQEENEECFGIENMSLSLQPGEEVEGKIRHTKLCARGHWRPAEDAKLKELVDKLGPQNWNSIAEHLQGRSGKSCRLRWFNQLDPRINRKAFNEEEEERLLAAHKMYGNKWAMISRLFPGRTDNAVKNHWHVIMARRQREKSCVYRRRKPTFQTLPKDLNLTLPKNAGSESTISSIIIDESASTGTNLSLTPSSAKPIPMPFQNPCPVQNHQAFGALMGLSGESRTPARDVGFDKYFGAWKGSREAGHIRRLMGVDQSHYSDSNSSEVTVSESVATDRTINLSISGASKNMGDNKANMSFIDFLGVGAT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr609g00001 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 207 IPR017930 -
Mupr609g00001 378 SMART sant 105 154 IPR001005 -
Mupr609g00001 378 SMART sant 157 205 IPR001005 -
Mupr609g00001 378 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Mupr609g00001 378 Gene3D - 106 157 - -
Mupr609g00001 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 152 IPR017930 -
Mupr609g00001 378 Gene3D - 159 219 - -
Mupr609g00001 378 Pfam Myb-like DNA-binding domain 106 152 IPR001005 -
Mupr609g00001 378 Pfam Myb-like DNA-binding domain 158 201 IPR001005 -
Mupr609g00001 378 CDD SANT 109 150 IPR001005 -
Mupr609g00001 378 CDD SANT 169 200 IPR001005 -
Mupr609g00001 378 SUPERFAMILY Homeodomain-like 106 199 IPR009057 -
Mupr609g00001 378 FunFam MYB transcription factor 106 157 - -
Mupr609g00001 378 ProSiteProfiles Myb-like domain profile. 106 152 IPR001005 -
Mupr609g00001 378 PANTHER MYB PROTEIN-RELATED 106 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr609g00001 Mupr-Chr609 826 2400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr609g00001 101 271 MYB Transcription Factor Family AT5G17800 61.017 1.21e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr609g00001 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr609g00001 K09422 - qsa:O6P43_009928 384.03