Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6099g00002 ATGGCGAGGATTAAGGTTTACGAGCTGAGGCAGAAGACGAAAGCTGATCTGTTGAATCAGCTGAAGGACCTGAAGGCAGAGCTTGCCTTGCTTCGTGTTGCTAAGGTCACCGGCGGTGCCCCTAACAAGCTCTCCAAGATAAAGGTGGTGAGGTTGTCCATTGCGCAGGTTTTGACCGTTATTTCTCAGAAGCAGAAGGCTGCGTTGAGGGATGCCTACAAGAACAAGAAGTATTTGCCTCTTGATCTGCGCCCAAAGAAGACCAGGGCTATTCGCAGAAGGCTTACTAAGCACCAGGCATCATTGAAGACAGAGAGGGAGAAGAAGAAAGAGACATATTTCCCAATGAGGAAGTATGCTATCAAGAAGTTGGCGGCTAAGGTTGGTGAGCACGGTTGTGTTTGTTCTCATATCCAAAAAGGCAAGTTCAAGAATCGAACCCAGTCCCAGAATAAGTCGTTTAATCATTCAACCTAA 477 0.4717 MARIKVYELRQKTKADLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALRDAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKETYFPMRKYAIKKLAAKVGEHGCVCSHIQKGKFKNRTQSQNKSFNHST 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6099g00002 158 FunFam 60S ribosomal protein L35 78 123 - -
Mupr6099g00002 158 NCBIfam 50S ribosomal protein L29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mupr6099g00002 158 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mupr6099g00002 158 Gene3D - 78 122 - -
Mupr6099g00002 158 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mupr6099g00002 158 Coils Coil 7 34 - -
Mupr6099g00002 158 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mupr6099g00002 158 PANTHER 60S RIBOSOMAL PROTEIN L35 1 122 IPR045059 GO:0000463|GO:0022625
Mupr6099g00002 158 FunFam 60S ribosomal protein L35 1 77 - -
Mupr6099g00002 158 CDD Ribosomal_L29_HIP 8 64 - -
Mupr6099g00002 158 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6099g00002 Mupr-Chr6099 7541 10169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6099g00002 1 122 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 89.344 9.01e-73 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6099g00002 K02918 - gmx:100305671 228.794