Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6090g00002 ATGGCTAATGATTCATCAAGGAAAGAACTGACCTCAAGACAAGATGAAGAGGCCTCACATGAAAGCATAGAGGAAGCAACATGTTCAGGCAAAGAAGGGTCTAAAAGCGGAGAGCAAAGTGACACAACAAGCTTGTCACAGGACAAAACAGGTCCAAAGAAACCAGACAAGGTAATTCCGTGTCCTAGATGCAACAGCATGGACACCAAGTTTTGCTACTACAATAATTACAACGTGAACCAGCCACGCCACTTCTGCAAGCACTGCCAGAGATATTGGACCGCCGGAGGAACCATGAGGAACGTGCCGGTGGGTGCCGGTCGCCGCAAGAACAAAAGCTCTTCTTCCGCGTCGCATTATCGCCAAATGATGGTTCCTGAGGCCCTTCAAACACCCCCTGGATCTGTCTTGAGCTTTGGAGCGGATTCTCCTCTCTGTGACTCCATGGCTTCTGTTTTGAGCCTTGCTGAGAAAACACAAAATGGTGTCCTCAACGGGTTTCATGCACCTAATAATGGAGATGATAACTCTAACTCGGTTGCTGCTTGTGTTATGGCTTCAACTTTGTGTGATAAGAGAGATAATGGTAGTAGCTCACATGAGGAATCAGTGGATAATAAGAGTACTTATCAAGGTTTCACTCCTCAATTGTGCTTCCCAGGTTCTTCTTCTCCTTGGCCTTATCCATGGAACCCTTCTTCTGTTTTGTCATTCCACCCCACACCACCATTCTGGGGTTGCATGCCAGTGATGCCACCACCACCACCCTCTTGGACTCTTAATTACCAATCTGCCCCTACCTCTGGTCCAAATTCACCAACCTTGGGGAAACACTCAAGAGATGGGGACATCTTGTTTCAAAAGCCAGCCACAGACAACATGGCAGAAAATAACAACAACAACAATACTAGTGTGTTGATCCCCAAGACACTGAGAATTGATGACCCTACTGAGGCTGCAAAGAGCTCCATATGGTCAACACTGGGGATCAAGAATGAGAAGGGGAATTCTCTCAATGGAGGAGGACTTTTCAAGGCATTTGCATCCAAAGGTGGTGCTGCTGGTGACAAGAACCATGTGGTGCTTGAAGCATCCCCAGTGTTGCAAGCCAACCCTGCTGCTTTGTCAAGGTCCCTTGTCTTCCATGAGAGGACATAA 1158 0.4741 MANDSSRKELTSRQDEEASHESIEEATCSGKEGSKSGEQSDTTSLSQDKTGPKKPDKVIPCPRCNSMDTKFCYYNNYNVNQPRHFCKHCQRYWTAGGTMRNVPVGAGRRKNKSSSSASHYRQMMVPEALQTPPGSVLSFGADSPLCDSMASVLSLAEKTQNGVLNGFHAPNNGDDNSNSVAACVMASTLCDKRDNGSSSHEESVDNKSTYQGFTPQLCFPGSSSPWPYPWNPSSVLSFHPTPPFWGCMPVMPPPPPSWTLNYQSAPTSGPNSPTLGKHSRDGDILFQKPATDNMAENNNNNNTSVLIPKTLRIDDPTEAAKSSIWSTLGIKNEKGNSLNGGGLFKAFASKGGAAGDKNHVVLEASPVLQANPAALSRSLVFHERT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6090g00002 385 Pfam Dof domain, zinc finger 56 113 IPR003851 GO:0003677|GO:0006355
Mupr6090g00002 385 MobiDBLite consensus disorder prediction 1 59 - -
Mupr6090g00002 385 MobiDBLite consensus disorder prediction 32 49 - -
Mupr6090g00002 385 ProSitePatterns Zinc finger Dof-type signature. 61 97 IPR003851 GO:0003677|GO:0006355
Mupr6090g00002 385 ProSiteProfiles Zinc finger Dof-type profile. 59 113 IPR003851 GO:0003677|GO:0006355
Mupr6090g00002 385 MobiDBLite consensus disorder prediction 191 211 - -
Mupr6090g00002 385 MobiDBLite consensus disorder prediction 1 28 - -
Mupr6090g00002 385 PANTHER CYCLIC DOF FACTOR 2 8 385 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6090g00002 Mupr-Chr6090 11872 13053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6090g00002 23 383 C2C2-Dof Transcription Factor Family AT5G39660 46.457 1.67e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr6090g00002 zf-Dof 3.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6090g00002 - - gmx:100775201 497.278