Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6076g00004 ATGTTGGAGGTTAAAAAGGAGCTCGAGGATTTCAATTTTGATTCACCTCATCCAGACGGACTCCATTTATGTCTTTCTTCGCCCAATTGCAATAGCGATACCTTTCGTCTGGAATCAACCCCAATTGCAGGGAGAATAAAAGCACAGGCTAGACGCTGGACAGAGGAAGAGGACAACCTTTTGATTGAGACGGTCAAGAAGCACAATGGAAGGAACTGGAAGAAAATAGGTGGATATGGCACTGCATACCTCCCTGGGCGAACTGACGTCCAATGCTTGCATCGCTGGCAAAAGGTTTTAAATCCTGATCTTGTAAAGGGGTCATGGACAAAGGAGGAAGATGATTGTCTCATTGAACTAGTCAGAAAGTATGGTATCAAGAGATGGTCTGTTATTGCAAAATACTTACCTGGTCGTATTGGAAAGCAATGCCGAGAGAGGTGGCACAATCATCTTGATCCAGCTATAAAGAAGGATGCATGGACAGAGGAGGAGGAGTTAATACTTGCTTACTATCACCAAATATACGGCAGTAAGTGGGCAGAAATTGCAAGAATTCTTCCCGGAAGGACTGACAATGCTATAAAAAATCATTGGAACTGCTCAATGAAGAGGAAATTGGATGCATCACCTTTGGGGTGTGACATAAATGTTGCCACCTCCGGTTTCTGCGCTTCTCGAATAAAGCCAGCACATGTATTGGCAAAAGTCGAGGGTCAAAGTTTCAACGGAATGGTTTCTCTCAAGCAGAATCACTGGTTGAAACATAGTGTTGATAACTTTCTAACAAAATTGATTCTTCAAAATACTTCTGGAGAGGAATCTTGCTCTGAAAAAAACTGTTTCGAAAGCAGGACTCCTAGTGCCTCAAGACAATTTTGGGATAATTCTATGGATATGCTTGCAACAAATTTGGATTGTTTACCTCGTACCAGTACTGTTACATGTGAGGCCTATAAATCTCCGAAACTGCAAAAGGTTTCTTTTTCAGATGCAGAGTTTAATGTGGGTGATGAATCTGACAGTCCCCTTTTGAGCTACTCAAAATCGGGCAACGGTGAGAAGAAAGGTCATGCTGGAGAGGGAAGCAACAACGAAATCAACATTATGCCACATGTTGAACTGCCACCCACAGAATTCAGTGAATGTCTAAGTCCAAAAACACACATGGCATGTGCAGACAATAATGACTGTACATGTACTCCCCCAATGTCTATACTCAGGAATTACACAGGTGACGTCAGCCCAGAAAGTGTGCTAAGAAGCTTAGCAATGAGTTATGAGAATGTTCCTTCTATTATAAGGAAAAGGACACCCAGGAAGGCAAGCTATTGTGACAATGACTAA 1347 0.4232 MLEVKKELEDFNFDSPHPDGLHLCLSSPNCNSDTFRLESTPIAGRIKAQARRWTEEEDNLLIETVKKHNGRNWKKIGGYGTAYLPGRTDVQCLHRWQKVLNPDLVKGSWTKEEDDCLIELVRKYGIKRWSVIAKYLPGRIGKQCRERWHNHLDPAIKKDAWTEEEELILAYYHQIYGSKWAEIARILPGRTDNAIKNHWNCSMKRKLDASPLGCDINVATSGFCASRIKPAHVLAKVEGQSFNGMVSLKQNHWLKHSVDNFLTKLILQNTSGEESCSEKNCFESRTPSASRQFWDNSMDMLATNLDCLPRTSTVTCEAYKSPKLQKVSFSDAEFNVGDESDSPLLSYSKSGNGEKKGHAGEGSNNEINIMPHVELPPTEFSECLSPKTHMACADNNDCTCTPPMSILRNYTGDVSPESVLRSLAMSYENVPSIIRKRTPRKASYCDND 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6076g00004 448 Pfam Myb-like DNA-binding domain 52 100 IPR001005 -
Mupr6076g00004 448 Pfam Myb-like DNA-binding domain 106 152 IPR001005 -
Mupr6076g00004 448 Pfam Myb-like DNA-binding domain 158 200 IPR001005 -
Mupr6076g00004 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 156 IPR017930 -
Mupr6076g00004 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 100 IPR017930 -
Mupr6076g00004 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 207 IPR017930 -
Mupr6076g00004 448 CDD SANT 108 152 IPR001005 -
Mupr6076g00004 448 Gene3D - 159 215 - -
Mupr6076g00004 448 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Mupr6076g00004 448 CDD SANT 52 100 IPR001005 -
Mupr6076g00004 448 MobiDBLite consensus disorder prediction 339 367 - -
Mupr6076g00004 448 ProSiteProfiles Myb-like domain profile. 45 100 IPR001005 -
Mupr6076g00004 448 SUPERFAMILY Homeodomain-like 103 199 IPR009057 -
Mupr6076g00004 448 SMART sant 157 205 IPR001005 -
Mupr6076g00004 448 SMART sant 49 102 IPR001005 -
Mupr6076g00004 448 SMART sant 105 154 IPR001005 -
Mupr6076g00004 448 Gene3D - 106 157 - -
Mupr6076g00004 448 SUPERFAMILY Homeodomain-like 51 110 IPR009057 -
Mupr6076g00004 448 Gene3D - 49 105 - -
Mupr6076g00004 448 ProSiteProfiles Myb-like domain profile. 101 152 IPR001005 -
Mupr6076g00004 448 FunFam Transcriptional activator Myb isoform A 106 158 - -
Mupr6076g00004 448 PANTHER MYB PROTEIN-RELATED 52 125 - -
Mupr6076g00004 448 FunFam Transcriptional activator Myb isoform A 49 105 - -
Mupr6076g00004 448 CDD SANT 160 200 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6076g00004 Mupr-Chr6076 32494 35830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6076g00004 53 208 MYB Transcription Factor Family AT5G02320 67.949 2.25e-73 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6076g00004 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6076g00004 - - gmx:100814774 670.233