Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6076g00002 ATGGCGACAACAAGGACCCCGTCCTCCGAGAACATCGTCGATCCGACGCCGTTGCTGGCCAATTCCGGTGGCTCCTCCTCCGGTGACCTCACCTCCGGGCGTCGATTCGCCCGGCGACAGCGGCTCCGGCAAGCGGCGCGGTTCCTCCGGCAGGCGAGCGGGCGCCGGATGATGCGCGAGCCGTCTATGTTGGTCCGAGAGGCAGCGGCGGAGCAATTGGAGGAACGGCAGAGCGATTGGGCGTATTCGAAGCCCGTGGTCGTTCTTGACATCGTTTGGAACTTGGCGTTCGTTGTTGTGGCTGGCACCGTGCTGGTTTTGAGCGCGAGTGAAGCACCTGGCATGCCTCTGAGGTTGTGGATTGTAGGGTATGCCATGCAATGCGTCCTTCACATGGTTTGCGTTTGTGTCGAGTATAGGAGGCGGAGGAGGCACCAAAGTGCCTCAGTGTCAGTGCAAGACAGGGTTGGGAGCAGCAGTGGTAATTTGAGCTTCTCTTCCAGAGAGGGTTCTGCTTCTGGGTCTGCGCAGTATGTGTCCTTGGGGCAGCTCGATGAGGAGGGTACTAGTGTTGCAAAGCATTTGGAATCAGCCAATACAATGTTTTCATTTATTTGGTGGATTATTGGATTCTACTGGGTATCATCTGGTGGTCAAGCATTAGCCCAAGATTCTCCTCAGCTTTACTGGTTTGTCCTCCCAGTCTCTCTCATTCAAATTTTTAATACTTTTGACAGAACCTACATGCTTTGCAGGCTATGTATAATCTTCCTGGGTTTTGATGTTTTCTTTGTCGTTTTCTGTGTTGCACTGGCGTGTATCATTGGTATTGCAGTTTGCTGTTGCCTTCCATGTATCATTGCACTTCTTTATGCAGTTGCAGACCAGGAAGGGGCATCAAAGGAAGACATTGAGCAGTTGTCAAAATTTAAATTCCGAAGAATTGAAAGCAATGAGAAACTTACGCGCACTACTATACCAGGACCTGTTGGAGGAATAATGACTGAATGCCAGGCTGATTCACCTATTGAACATGTTCTTGCTGAGGAGGATGCGGAATGTTGCATCTGCCTTTCTTCTTATGACGATGGGGTTGAGCTAAGAGAACTTCCTTGTGGTCACCATTTTCACTGTGTCTGTGTGGATAAATGGTTGTATATTAATGCTACATGCCCCCTATGCAAGTATAACATCTTAAAAAGTAGCAACCTCGGTCAAGAGGAAGTGTAG 1230 0.4992 MATTRTPSSENIVDPTPLLANSGGSSSGDLTSGRRFARRQRLRQAARFLRQASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRHQSASVSVQDRVGSSSGNLSFSSREGSASGSAQYVSLGQLDEEGTSVAKHLESANTMFSFIWWIIGFYWVSSGGQALAQDSPQLYWFVLPVSLIQIFNTFDRTYMLCRLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEKLTRTTIPGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSSNLGQEEV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6076g00002 409 Pfam Ring finger domain 353 395 IPR001841 -
Mupr6076g00002 409 MobiDBLite consensus disorder prediction 1 33 - -
Mupr6076g00002 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 340 407 IPR013083 -
Mupr6076g00002 409 ProSiteProfiles Zinc finger RING-type profile. 354 395 IPR001841 -
Mupr6076g00002 409 PANTHER TARGET OF ERK KINASE MPK-1 52 400 - -
Mupr6076g00002 409 SMART ring_2 354 394 IPR001841 -
Mupr6076g00002 409 MobiDBLite consensus disorder prediction 150 171 - -
Mupr6076g00002 409 FunFam E3 ubiquitin-protein ligase At1g12760 340 405 - -
Mupr6076g00002 409 SUPERFAMILY RING/U-box 344 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6076g00002 Mupr-Chr6076 6829 13387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6076g00002 22 402 C3H Transcription Factor Family AT1G68070 46.615 2.18e-111 328