Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6074g00006 ATGGAAGGTTGCAAAAAGTCTCCACTAAAGCCTTGGAAGAAAGGGCCAACCAGGGGCAAAGGTGGCCCCCAAAATGCCTCATGTGAGTACAGAGGTGTTAGGCAAAGAACATGGGGCAAATGGGTTGCTGAAATAAGAGAGCCAAAGAAGAGAACCAGACTCTGGCTTGGCTCTTTTGCCACAGCAGAAGAAGCTGCCTTGGCCTATGATGAGGCTGCAAGGAGACTCTATGGTCCTGATGCTTACCTTAACCTCCCCCACATGCAACCAAACTTCATCACTTCCACCACCAAATCTCAAAAGTTCAAGTGGTTCCCATCCAAGAACTTCATTTCCATGTTCCCCTCACATGGATTGCTCAACCTCAATGCCCAACCAAGTGTCCATGTGATCCACCAGAGGCTTCAACAACTCAAGCAAAAAGGGGTGGTTGCAACAGATCAATCACCACATTCTAGTTCATCCACTGATCCAAAAGTAGAAGAACTTGAGAACCTTGGCATCCAAAACCATGCAGAAACCCTTCCTCCACTCCAACAAGATGCCCAAACTTCATCACAAAAAACACTTGGTGGTTTTGAGGAGAAACCCCAGATAGACCTACTTGAGTTTCTTCAACAGATGGGAATACTAAAAGAAGAAAGAGAGTCAGAGAAAACTGACAGCTCAAGAAGTTCAACAGTGTCTGAAGCTGCATCAAGAGAAGACAATGAACATCCAGGAGTGTTTTCTGACATGAGTGTTGACTGGGAGGCACTTATTGAGATGCATGACAATGGAGTTGCAGATAATTATCATGCATCAGGAGACATCTTTGAGGCATGTGACATAAGCGAGGACCTTACTTTCTCCCCTTCCATTTGGAACTACTAA 873 0.4536 MEGCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAALAYDEAARRLYGPDAYLNLPHMQPNFITSTTKSQKFKWFPSKNFISMFPSHGLLNLNAQPSVHVIHQRLQQLKQKGVVATDQSPHSSSSTDPKVEELENLGIQNHAETLPPLQQDAQTSSQKTLGGFEEKPQIDLLEFLQQMGILKEERESEKTDSSRSSTVSEAASREDNEHPGVFSDMSVDWEALIEMHDNGVADNYHASGDIFEACDISEDLTFSPSIWNY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6074g00006 290 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Mupr6074g00006 290 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Mupr6074g00006 290 MobiDBLite consensus disorder prediction 1 27 - -
Mupr6074g00006 290 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Mupr6074g00006 290 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Mupr6074g00006 290 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Mupr6074g00006 290 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 253 - -
Mupr6074g00006 290 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Mupr6074g00006 290 MobiDBLite consensus disorder prediction 213 243 - -
Mupr6074g00006 290 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Mupr6074g00006 290 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Mupr6074g00006 290 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6074g00006 Mupr-Chr6074 11539 12411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6074g00006 5 290 AP2-EREBP Transcription Factor Family AT3G57600 51.724 3.89e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr6074g00006 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6074g00006 - - gmx:100808363 405.216