Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6072g00001 ATGGGTACTGGTTGGAGAAGAGCGTTCTGCACCCGCGACCCTGCATCTACCATATCGGATAAACAGCCAGGAAGCCCAAGCCCGAATCCGAGCCCAAGAAGCTGCGCCCGATTGGGTTTTCTGTCGGGAGGTAGCAACCCGTCGACACCGCGCTTGCGTTGCACAACAATCGCGGAAGCTGGTTCTCATACAGTTACAGTAAATGAGAGCCCAAGAGTTAAGAGCAAGACGACGACCCCGAGGGCAACCAAGTCCCCCAAAACTCTCTCGGTCTCAAATCCAACTTCTCCGCGCTCCCCTCTCAAGCTCTCCCTCTTCAAGAACAGCTTCAAATTCAGGAGTAGCTGTGGAATTTGCTTGAACAGCGTGAAGACGGGACAAGGTACGGCGATTTACACTGCGGAATGCGGTCACGCGTTTCATTTTCCGTGTATCGCAGCGCATGTACGCAAGCATGGAAGCCTCATATGCCCCGTCTGCAACGCCGCATGGAAAGACGTGCCTCTACTCGCGGCGCACAAGAACCTTGCCACGCAAAACGACGTCGCACAGAGAACCCATGAACACCCCAATGCCAGCGACAAAAAGGCAACAGAACACACCTCCCCCGTTTTCAAAACCAACAACCACGTGGAGCCACACAAGCATTCCGATTCGCTCAGGTCCTACGACGACGACGAGCCCCTCCTCTCTCCCACCGCCGGCGGCCGGATCATCCCCATTCCCGAAGCCGACGAGAATGCGGAAGACGACGACGACGAAGACGCCGGCGAGTTCCAGGGCTTTTTCGTCAATCCCAAGAACTCGTCCTCGTCAAAGTCCTACTCCGATTCGTTCCAAACCGGCGAGAGGGATTGCAGAACCGTTCAGGTGAAACTGATGCCGGAGTGCGCGGTCATATCTGCTTCCCGAACGCACGAGACCTACGCTTTGGTTTTGAAAGTGAAGGCTCCGCCGCCGCCACCGCCTGCACCGCGGAGCAGCGCGACGCCGTCTCAGCGCGCGCCGATAGATCTCGTGACCGTTCTCGACGTGGGCGGCAGCATGAGCGGCGCGAAGCTGCACATGCTAAAGCGCGCGATGCGTTTGGTCATCTCTTCCCTCGGCCCCGCGGACAGGCTCTCCATCGTGGCTTTCTCGGCCACCTCGAAACGGCTCTTACCATTGCGAAGAATGACGTCACAAGGTCAGCGCGTGGCCCGGCGCATCATTGACCGGCTGGTGAGCGGTCAAGGAACCGGCGTGGGGGACGCGCTGAGGAAAGCAACAAGAGTCCTGGAGGACCGCAGAGAGAGAAACCCGGTGGCGAGCGTGATGCTGTTATCAGATGGTCAAGAAGAGAGGGTTCAAAGTCAAAGCAGTAACAAGGGTGGCAGTAATAATAATCAGCGGAAGGCGTCGAGCCACGTGTCGTCGACCCGGTTCGCGCACATCGAGATTCCGGTTCACGCGTTCGGGTTCGGGGCGAAAAGCGGTTACAGCCAGGAACCGGGGGAGGAGGCGTTTGCGAAGTGCGTGGGTGGGCTTTTGAGCGTAGTGGTGCAGGACTTAAGGATTCAGGTGGGTTTCGAGTCGGAGTCCGTTGAGATCAACGCGATTTACTCGTGCAGTGGAAGGCCCACTTTACTGAGCTCCGGGGCCGTGCGGCTGGGTGATTTGTACGCCGAGGAAGAGAGGGAGTTGTTGGTAGAGTTGAGAGTTCCCGCCTCTGGGAATGGAATTGGGACCCACCACGTTATGACGGTCCGGTGCCTGTACAAGGACCCTGCTAGCCAGGAGATTGTATACGGTAGGGAACAGGGTCTTCTGGTGCCGCCGCCACAGAGCGTGCGTTGTTCCGGTTCCAGAATCCAGAGGCTCAGGAATCTATTCATAACCACCCGAGCCATAGCCGAGTCAAGGAGGCTCATCGACCATAACGCTGACTTCACCAGCGCTCATCATTTGCTTGCCTCGGCGCGTGCGCTGCTCATGCAGTCCAGCGCGGCTGAGGAGTACGTGCGCGGCTTGGAGGCTGAGCTGGCAGAGCTTCATTGGCGGAGACAGCATGAACAGGTGCAGGTGCAGCAAATGATGCAACAGCGCAGAAGAGGAAGCGACAGAGAGGTGACGCTGGTGGACGAGAATGGCGAGCCGCTCACGCCGACGTCGGCTTGGAGAGCCGCCGAGAAGCTGGCTAAGATGGCAATGATGAAGAAGTCTTTGAATAGAGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTAA 2250 0.5778 MGTGWRRAFCTRDPASTISDKQPGSPSPNPSPRSCARLGFLSGGSNPSTPRLRCTTIAEAGSHTVTVNESPRVKSKTTTPRATKSPKTLSVSNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECGHAFHFPCIAAHVRKHGSLICPVCNAAWKDVPLLAAHKNLATQNDVAQRTHEHPNASDKKATEHTSPVFKTNNHVEPHKHSDSLRSYDDDEPLLSPTAGGRIIPIPEADENAEDDDDEDAGEFQGFFVNPKNSSSSKSYSDSFQTGERDCRTVQVKLMPECAVISASRTHETYALVLKVKAPPPPPPAPRSSATPSQRAPIDLVTVLDVGGSMSGAKLHMLKRAMRLVISSLGPADRLSIVAFSATSKRLLPLRRMTSQGQRVARRIIDRLVSGQGTGVGDALRKATRVLEDRRERNPVASVMLLSDGQEERVQSQSSNKGGSNNNQRKASSHVSSTRFAHIEIPVHAFGFGAKSGYSQEPGEEAFAKCVGGLLSVVVQDLRIQVGFESESVEINAIYSCSGRPTLLSSGAVRLGDLYAEEERELLVELRVPASGNGIGTHHVMTVRCLYKDPASQEIVYGREQGLLVPPPQSVRCSGSRIQRLRNLFITTRAIAESRRLIDHNADFTSAHHLLASARALLMQSSAAEEYVRGLEAELAELHWRRQHEQVQVQQMMQQRRRGSDREVTLVDENGEPLTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6072g00001 749 SMART VWA_4 336 529 IPR002035 -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 180 279 - -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 436 470 - -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 1 49 - -
Mupr6072g00001 749 SUPERFAMILY vWA-like 336 518 IPR036465 -
Mupr6072g00001 749 Pfam RING-like zinc finger 116 145 IPR001841 -
Mupr6072g00001 749 CDD RING-H2_WAVH2 113 166 - -
Mupr6072g00001 749 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 114 744 - -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 444 470 - -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 209 225 - -
Mupr6072g00001 749 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 213 IPR013083 -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 65 98 - -
Mupr6072g00001 749 ProSiteProfiles VWFA domain profile. 338 488 IPR002035 -
Mupr6072g00001 749 Pfam von Willebrand factor type A domain 339 445 IPR002035 -
Mupr6072g00001 749 CDD vWA_C3HC4_type 337 514 - -
Mupr6072g00001 749 ProSiteProfiles Zinc finger RING-type profile. 116 161 IPR001841 -
Mupr6072g00001 749 SMART ring_2 116 160 IPR001841 -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 263 279 - -
Mupr6072g00001 749 MobiDBLite consensus disorder prediction 187 201 - -
Mupr6072g00001 749 Gene3D von Willebrand factor, type A domain 338 512 IPR036465 -
Mupr6072g00001 749 SUPERFAMILY RING/U-box 115 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6072g00001 Mupr-Chr6072 8633 10982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6072g00001 116 166 C3H Transcription Factor Family AT1G74410 43.137 2.83e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6072g00001 - - gmx:100782780 1162.52