Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6060g00001 ATGGATCCTACCGAGCAAATTTCTGAAGAATGGAGTTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGACTTCATGAACCACTTGCTTGGTAACTGCTCACTCCCTGAGAACCTGTGTGGAAATCTCAATTTGGAAATTCCATCAGCAATATGGCCTGGCCATGAATCTACAATTGTGAGCGTGACAGGCATCAACAATGCTAATAATAGTAATACTAATTATTTACGTTTTTTACAAGGAACTAGCTCCACTACTGATAGTAGCAATATATTTCCTACTACTAGTGGTAATAATAACTGTTGCTTGGATGATCCAGTTGCCAACATTGGCTACATGTCCATGGATTTTTCCTTAGGGAATGCCAAGTTCAGCACATATAATGTTCAGGGGAGTGACAGCCAACAGATAAATGAAAATACTGATGAAGAGTTATGTCTAGAGGTTATTGCTGACAAGAATTTGCAGGATCACCAGGAATGTGAAGTACCAGTTTCTGAAGCAGCAGAAGAGGATATAAACACCAATCTGGAGAAGTCAGGAAAAAGATCTAGGGACTCAATGCAGGTGAGAAAGAGCAAGAGAAATGTCAAATCTATGAAGAAACCAAAATGTGGTTCTATAAGTAACTTTGAAGAGGGTAGAAGTCCTGGTGTTCAGGGTCAGAGCTTGAGCAGTTGCTGCTCAGAGGATGATGACTCCAATGCTTCTCATGAGCTAAATGGAGGAGGATCTTCAAGTTTGAGCCTGGAGGATTCTACAGCTGTGAAGTTAAAGGGGAAAAAATCAACATCTAATAGAGGTTCTGCTACTGATCCACAGAGTGTATATGCAAGAAGAAGAAGAGAAAGAATAAACGAAAGGTTGAGAATCCTACAAAACCTTGTCCCCAATGGAACCAAGGTGGATATCAGCACCATGCTCGAGGAAGCTGTCCAATATGTGAAGTTTTTACAGCTCCAAATTAAGCTGCTGAGCTCTGATGATCTGTGGATGTACGCTCCCATAGCTTATAATGGAATGAACATTGGACTAGACCTCAATATTACCCCAACCAAACAACCA 1065 0.4103 MDPTEQISEEWSSLSGLYTAEEADFMNHLLGNCSLPENLCGNLNLEIPSAIWPGHESTIVSVTGINNANNSNTNYLRFLQGTSSTTDSSNIFPTTSGNNNCCLDDPVANIGYMSMDFSLGNAKFSTYNVQGSDSQQINENTDEELCLEVIADKNLQDHQECEVPVSEAAEEDINTNLEKSGKRSRDSMQVRKSKRNVKSMKKPKCGSISNFEEGRSPGVQGQSLSSCCSEDDDSNASHELNGGGSSSLSLEDSTAVKLKGKKSTSNRGSATDPQSVYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDLNITPTKQP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6060g00001 355 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 94 327 IPR045843 GO:0003700|GO:0006355
Mupr6060g00001 355 MobiDBLite consensus disorder prediction 213 231 - -
Mupr6060g00001 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 269 318 IPR011598 GO:0046983
Mupr6060g00001 355 MobiDBLite consensus disorder prediction 172 193 - -
Mupr6060g00001 355 MobiDBLite consensus disorder prediction 238 273 - -
Mupr6060g00001 355 MobiDBLite consensus disorder prediction 161 280 - -
Mupr6060g00001 355 Gene3D - 272 332 IPR036638 GO:0046983
Mupr6060g00001 355 SMART finulus 275 324 IPR011598 GO:0046983
Mupr6060g00001 355 Pfam Helix-loop-helix DNA-binding domain 279 319 IPR011598 GO:0046983
Mupr6060g00001 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 334 IPR036638 GO:0046983
Mupr6060g00001 355 FunFam Basic helix-loop-helix transcription factor 270 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6060g00001 Mupr-Chr6060 2383 4368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6060g00001 10 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 39.837 9.55e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6060g00001 HLH 8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6060g00001 - - gmx:100817334 561.607