Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6050g00002 ATGGCGGCGTCGCGGAGGCTCCGGGAGCTTCAATCACAAGCGGCGAACAAGATCTGCGTCGACTGCTCCCAGAAGAACCCGCAGTGGGCCTCCGTTTCATATGGCGTCTTCATGTGCCTCGAGTGCTCCGGCAAGCACCGTGGCCTCGGCGTTCATATCTCCTTTGTCCGATCCGTCACCATGGACTCTTGGTCTGAAATCCAAATCAAGAAAATGGAAGCCGGAGGCAACGAAAAACTCAACGCCTTCCTCGCTCAGTACTCAATCCCCAAGGAGACCGACATCGTCACCAAGTACAACACCAACGCCGCCGCCGTCTACCGTGACCGGATCCAGGCCATCGCCGAGGGCCGCCCCTGGCGCGATCCGCCTGTTGTCAAAGAAAACCTCGCCACCGGAAAGCCGCCGCTCTCGCAGACGCGGAAAACTGCCGATGGAGGCTGGGACGACTGGGATAGTCCGGGAGACTTCCGGAGCAAGTCGACCGGGGATTTCAGGAGCCTGAACGGCGGCGGTGCGCCGGCGAGGTCGCGGTCGACGGAGGATATCTACACGCGGTCGCAGCTGGAGGCGTCGGCGGCGAACAAGGAGGGGTTCTTCGCCCGGAAGATGGCGGAGAACGAGTCGCGGCCGGAGGGGCTTCCGCCGTCGCAGGGAGGGAAGTATGTCGGTTTTGGATCGAGTCCGCCGCCTCAGCAGAGGAACGATTCGCAAAACGACTATTTCTCTGTCGTTTCGCAGGGGATTGGGAAATTGTCCGTGGTTGCTGCCTCTGCGGCTCAGTCTGCGGCTAATGTTGTTCAGGCTGGCACGAAGGAGATCACTTCTAAGGTCAAGGAAGGTGGTTATGATCATAAGGTCAATGAAACTGTCAATGTTGTCACTCAAAAGACAACAGAGATTGGCCATAGGACTTGGGGCATAATGAAAGGAGTGATGGCTTTGGCTTCCCAGAAGATCGAGGAGTACACCAGAGATGATCCAAACTGGCAACGAAATGAGAATGACAGAAATGGTCATTATCAGGATTTTAATCAAGAGAACAAAGGCTGGAATTCTTCTACTGGAAGAGAACAATCTTCATCAGGGCAATATAAAACTCACAGCTCAAGCTCTTGGGATGAGTGGGACCACAAGGATAGCAGGAAGGAAGAACCAGCTAAAGGATTGAGTCCTTATTCATCCGGTGCGCAGTTTAGTAGCCACAACTCAAGCTCTTGGGATGATTGGGGACACAGAGATTCTAGGAAGGAAGAACCAGCTCCCCATAATAGTGATGGTTGGGCTGGCTGGGATAATGCCAAAGATGATGGATTTGATCATTTTTCTGAAGGTGCATCTAATAAGAAAGGTGTTGGTCATAATGGGAAATCAGATGGCTCTTGGACAGAGGGAGGCTTTCTCTAA 1407 0.538 MAASRRLRELQSQAANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNEKLNAFLAQYSIPKETDIVTKYNTNAAAVYRDRIQAIAEGRPWRDPPVVKENLATGKPPLSQTRKTADGGWDDWDSPGDFRSKSTGDFRSLNGGGAPARSRSTEDIYTRSQLEASAANKEGFFARKMAENESRPEGLPPSQGGKYVGFGSSPPPQQRNDSQNDYFSVVSQGIGKLSVVAASAAQSAANVVQAGTKEITSKVKEGGYDHKVNETVNVVTQKTTEIGHRTWGIMKGVMALASQKIEEYTRDDPNWQRNENDRNGHYQDFNQENKGWNSSTGREQSSSGQYKTHSSSSWDEWDHKDSRKEEPAKGLSPYSSGAQFSSHNSSSWDDWGHRDSRKEEPAPHNSDGWAGWDNAKDDGFDHFSEGASNKKGVGHNGKSDGSWTEGGFL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6050g00002 468 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 388 IPR044519 GO:0005096|GO:0016192
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 407 423 - -
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 371 387 - -
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 325 468 - -
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 145 159 - -
Mupr6050g00002 468 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Mupr6050g00002 468 Pfam Putative GTPase activating protein for Arf 5 107 IPR001164 GO:0005096
Mupr6050g00002 468 SUPERFAMILY ArfGap/RecO-like zinc finger 5 114 IPR037278 -
Mupr6050g00002 468 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Mupr6050g00002 468 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Mupr6050g00002 468 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 344 370 - -
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 206 238 - -
Mupr6050g00002 468 FunFam ADP-ribosylation factor GTPase-activating protein 1 129 - -
Mupr6050g00002 468 CDD ArfGap_ArfGap1 3 117 - -
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 121 183 - -
Mupr6050g00002 468 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Mupr6050g00002 468 Gene3D Arf GTPase activating protein 1 125 IPR038508 -
Mupr6050g00002 468 MobiDBLite consensus disorder prediction 325 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6050g00002 Mupr-Chr6050 4556 8112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6050g00002 5 91 C2H2 Transcription Factor Family AT4G21160 47.727 1.36e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6050g00002 K12492 - gmx:100792658 812.372