Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6043g00003 ATGGACACAATGGATTTTCATCAAGAGACTCTAGTGAACATTAATAATGACTTTGATCAGGATCCCAACTTAGATCAGTTTACCAATTTGATTCGTTGGGAGAATAAAGAAGGTATCTGTAACTTCAATTCTGAGCCAATCAATGAATGCTTCATTGATAACTCATTCCTGTCACACTCACACCCTCCAATCCCATTTGATCAGTGCAATAGCAATTCTGTGAATGTTTATGATCCAAGCTCTACACTTAGCTCCTTCTCTTGTTTTGATGGGGAAGCCAAGGGAAGAGGAAAAGAAGAAGAAGAAAATGACATGGGGGATTCTTCAGCAACAACCACCACCACCACAACTAATAGTGTTCAGGGTAAGCCAAGTTCAAAAACTGATAGGTCCAAAACTTTGGTTTCTGAAAGGAAAAGAAGAGACAGAATGAAGGAGAAGCTTTATGCATTAAGGTCTTTGGTTCCCATCATAACTAAGATGGATAAGGCCTCTATCGTTGGAGATGCTGTTTCATATACGCATGAGCTTCAAGCACAAGCCAAGATGCTGAAGGCTGAGGTTGAAGCACTTGAAGAAACATACTTATTGATGTCCAAAAAGGATCAAGGCTCGATTGAGAACCCCTTGAAGGTTCAATTCACCAACAACAGCCGTTCAATATGCAAGAAGATAATCCAGATGGACATATTTCAAGTGGATGAAAAAGGGTTTTATGTGAAAATAGTATGCAACAAAGGAGAAGGAGTGGCTGCCTCATTGTACAGGTCTCTTGAATCTCTGACAGGCTTCAATGTTCAGAATTCAAACTTGGAAACAATTTCTGACAGTTTTCTACTTACATTTTCATTGAATCTTTTGGTTACTGATTTTGTCAATGATGCGAAAGGCTCTGAGCCAGAAATTAACCTGCCCAACTTGAAGCTATGGGTGACTGAAGCTTTTGTGAACCAAGGCTTTGAATTCATACCTTTTTTTTATGCTTGA 987 0.3921 MDTMDFHQETLVNINNDFDQDPNLDQFTNLIRWENKEGICNFNSEPINECFIDNSFLSHSHPPIPFDQCNSNSVNVYDPSSTLSSFSCFDGEAKGRGKEEEENDMGDSSATTTTTTTNSVQGKPSSKTDRSKTLVSERKRRDRMKEKLYALRSLVPIITKMDKASIVGDAVSYTHELQAQAKMLKAEVEALEETYLLMSKKDQGSIENPLKVQFTNNSRSICKKIIQMDIFQVDEKGFYVKIVCNKGEGVAASLYRSLESLTGFNVQNSNLETISDSFLLTFSLNLLVTDFVNDAKGSEPEINLPNLKLWVTEAFVNQGFEFIPFFYA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6043g00003 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Mupr6043g00003 328 Pfam Helix-loop-helix DNA-binding domain 136 178 IPR011598 GO:0046983
Mupr6043g00003 328 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 58 317 - -
Mupr6043g00003 328 SMART finulus 134 183 IPR011598 GO:0046983
Mupr6043g00003 328 Coils Coil 174 201 - -
Mupr6043g00003 328 Gene3D - 121 194 IPR036638 GO:0046983
Mupr6043g00003 328 MobiDBLite consensus disorder prediction 91 141 - -
Mupr6043g00003 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 195 IPR036638 GO:0046983
Mupr6043g00003 328 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 124 194 - -
Mupr6043g00003 328 MobiDBLite consensus disorder prediction 107 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6043g00003 Mupr-Chr6043 35338 36903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6043g00003 4 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 48.048 8.71e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6043g00003 HLH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6043g00003 K26214 - gmx:100778649 447.973