Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6043g00002 ATGGAAACCACGGCAGAGGTTGTTTCATCTCACTGTCTTGTTGTATCAGAGAACTCTGAATCCAACCCCACGCAACTTTCTTCTATGGAACTTGAGATTCAGATTTTTGGGTACGTTTTCATGTATGAAAATTTTGTTGAGAGAGAAATTTCTTATATTGGTTCTGTGGTGTTGTGTTGTGTTGAGTTAGCTGCACGCACTACCGAAGGAGATGCAGGATCAGAGCGCCGTGTTGTGATGAGGCATTGCCATAATGAAGCTAAGAACTCCGAGGAGGTTGATTCTGTGGATCATCATGATATTCCACGCCATCAAATTAAGAAGGTTATATGCTCCTTATGTGATACAGAGCAAGATGTTCAACAGTACTGTATAAACTGTGGAATATGCATGGGCAAGTATTTTTGTGCTATATGCAAATTCTTTGATGATGATATTTCAAAGAACCAATACCACTGTGACGAATGTGGCATCTGCAGAACTGGAGGCAAGGATAACTTTTTCCATTGCAAGAGATGTGCATGTTGCTACTCCAAGGTAATGGAAAAGGGGCATCGTTGTGTAGAAGGAGCAATGCATCATAATTGCCCCGTTTGCTTTGAGTATCTATTTGATACAGTAAGAGAAATCACTGTCTTACCTTGCGGCCACACTATACATTTAGATTGTGTTAAAGAGATGGAGCAACATCATAGGTATTCATGTCCTGTTTGCTCAAAATCCATCTGTGACATGTCAAGTATATGGAAGAAGCTTGACGAAGTGATTGCATCAACTCCAATGCCTGAAACGTACAAAAGTAAGATGGTGTGGATACTTTGCAATGATTGTGAAGTAAAGTCTCATGTACAATTCCATTTTGTGGCCCATAAGTGCTTAAGTTGCGACTCATACAACACAAGACAGATACAGGGAATGCCTCCTACATCATGCTCGTCTAGGGTGACTGAAATGTGCTCTGCTTTGGATTTTGGGCCTTTTGTGGCCTGGCTTGTATGTTATGCTAATTCAAAAAAGAAAGAAAATACTGACCCGAAAAAGTAA 1044 0.4042 METTAEVVSSHCLVVSENSESNPTQLSSMELEIQIFGYVFMYENFVEREISYIGSVVLCCVELAARTTEGDAGSERRVVMRHCHNEAKNSEEVDSVDHHDIPRHQIKKVICSLCDTEQDVQQYCINCGICMGKYFCAICKFFDDDISKNQYHCDECGICRTGGKDNFFHCKRCACCYSKVMEKGHRCVEGAMHHNCPVCFEYLFDTVREITVLPCGHTIHLDCVKEMEQHHRYSCPVCSKSICDMSSIWKKLDEVIASTPMPETYKSKMVWILCNDCEVKSHVQFHFVAHKCLSCDSYNTRQIQGMPPTSCSSRVTEMCSALDFGPFVAWLVCYANSKKKENTDPKK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6043g00002 347 FunFam RING finger and CHY zinc finger domain-containing protein 1 267 312 - -
Mupr6043g00002 347 SUPERFAMILY Zinc hairpin stack 132 189 IPR037275 -
Mupr6043g00002 347 ProSiteProfiles Zinc finger CHY-type profile. 53 129 IPR008913 GO:0008270
Mupr6043g00002 347 SUPERFAMILY RING/U-box 195 244 - -
Mupr6043g00002 347 ProSiteProfiles Zinc finger CTCHY-type profile. 131 195 IPR017921 -
Mupr6043g00002 347 Pfam CHY zinc finger 81 141 IPR008913 GO:0008270
Mupr6043g00002 347 Pfam RING-type zinc-finger 196 236 IPR027370 -
Mupr6043g00002 347 CDD RING-H2_Pirh2-like 195 239 - -
Mupr6043g00002 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 268 IPR013083 -
Mupr6043g00002 347 ProSiteProfiles Zinc finger RING-type profile. 196 239 IPR001841 -
Mupr6043g00002 347 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 78 304 - -
Mupr6043g00002 347 Pfam Zinc-ribbon 243 301 IPR039512 -
Mupr6043g00002 347 Gene3D - 269 307 - -
Mupr6043g00002 347 SUPERFAMILY CHY zinc finger-like 81 130 IPR037274 GO:0008270
Mupr6043g00002 347 SMART ring_2 196 238 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6043g00002 Mupr-Chr6043 25030 28830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6043g00002 94 308 C2H2 Transcription Factor Family AT3G18290 40.807 9.59e-47 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6043g00002 K10144 - gmx:100812709 525.013