Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6036g00001 TTGGGCCGCGATTGGATCTTTTTGCTTTTGAATCCGTGCCCTAGCTTCTTCCTCCTCTTTGTCCTCCGCCATTGCAGAGCACAGACCTCAGGCTCCAACCTTGGCCACAAACCCAATTCACGAGGGATCGGAATCGCCATCATGGGGAAGAAGAAGAAGAGGGTTTCTTCCAAGGTGTGGTGTTACTACTGCGATCGCGAATTCGACGACGAGAAGATCCTGGTTCAGCATCAGAAAGCCAAGCACTTCAAGTGCCATGTCTGCCACAAGAAGCTCTCCACCGCCGGCGGCATGGCCATCCACGTCCTCCAGGTCCACAAGGAATCCGTCACCAAGGTGCCCAATGCAAAACCTGGCAGAGAGAGTACGGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTATGGTGAAGAAGAGGATGACGTTCCATCAAAGGCAGCCAAGGTGGATATTCCATCAACTCAACTTGTAGGTGGAATGGTTCCACCACCTTTGGGTGCAGGATATCCCCCTCGACCAACCATACCCGCAATTCCACCAATTTATAATCCAGCTGTACCCATGCCTCCAAATGCTTGGGTGGTTCCACCTCGACCTCAGCCATGGTTTCCTCAGCCTCCAGCTGTTTCAGTTCCTCCACCTGCCCCATATGCACAACAGCCATTATTTCCTGTTCAGAATGTGAGGCCTCCACTGCCAGCAACTGCTTCTCCTGCACTCCAAACTCAGATTACTCCTCCTGGACTGCCTTCATCTGCACCCGTCCCAGTTTCACAACCTTTATTTCCCGTTGTTGGAAATAACCATACAACAACTCAAAGTTCAACATTTTCTGCTGCACCTCTGCCCTCAAGTATTCCATCAGTTACTCCACTTATGTCTGCAAATGTCCCTGTTGATGCACACTTGAGTGCCAACTCTTTGGTAACAAGTAGTTATCAGGCTGTAGGGGTTCCAGGTGGAGCAGCAAGTAACTCCCATTCTTATGCTTCTGGTCCCAATACTGGTGGTCCTTCAATTGGGCCTCCCCCAGTAATTGCAAACAAAGCTCCTGCTTCTCAGCCTGCCACCAATGAAGTCTACTTAGTTTGGGATGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTGCCAAAATATCAGGTGCATGATGAAAGTAGCCAGGTAAGTCATACTACCTCTGTAATAGATGGAGTTGCTTTCACATCTAACCAGATGAGTAGGCTTTATGCTTCCTATTTTCAGATTCAGTTGTTTACGCATTGTTTCCTATTTAAAGAGATGAGCTCCATTGATGCAGCCATAGATAAGAGGATACTTGAAAGCAGTAACCTTGTTGGTGCGAGCGATTCTTTGCCAAAATGGGCAAATGGGCCTACGATGTTT 1410 0.4809 LGRDWIFLLLNPCPSFFLLFVLRHCRAQTSGSNLGHKPNSRGIGIAIMGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPSTQLVGGMVPPPLGAGYPPRPTIPAIPPIYNPAVPMPPNAWVVPPRPQPWFPQPPAVSVPPPAPYAQQPLFPVQNVRPPLPATASPALQTQITPPGLPSSAPVPVSQPLFPVVGNNHTTTQSSTFSAAPLPSSIPSVTPLMSANVPVDAHLSANSLVTSSYQAVGVPGGAASNSHSYASGPNTGGPSIGPPPVIANKAPASQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQVSHTTSVIDGVAFTSNQMSRLYASYFQIQLFTHCFLFKEMSSIDAAIDKRILESSNLVGASDSLPKWANGPTMF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6036g00001 470 CDD SUF4-like 60 139 - -
Mupr6036g00001 470 ProSitePatterns Zinc finger C2H2 type domain signature. 85 106 IPR013087 -
Mupr6036g00001 470 PANTHER ZINC FINGER PROTEIN 207 48 447 - -
Mupr6036g00001 470 ProSitePatterns Zinc finger C2H2 type domain signature. 61 82 IPR013087 -
Mupr6036g00001 470 ProSiteProfiles Zinc finger BED-type profile. 54 113 IPR003656 GO:0003677
Mupr6036g00001 470 Gene3D Classic Zinc Finger 46 113 - -
Mupr6036g00001 470 MobiDBLite consensus disorder prediction 334 359 - -
Mupr6036g00001 470 SMART c2h2final6 59 82 IPR013087 -
Mupr6036g00001 470 SMART c2h2final6 83 106 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6036g00001 48 418 C2H2 Transcription Factor Family AT1G30970 63.212 6.89e-143 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr6036g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6036g00001 - - gsj:114413692 691.419