Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6030g00004 ATGAGCAGCTTGAGGCCCGAGTCTCATGTAGCACAGCAAATTCGGCGTGATAAATTGAGAATCCAGAACAGTTCTCAGCATCCACATGAATTCCCTAACAATCTCGAACAGTTGTCGTTACAACCGGGGTTCAACTTGGATCTTCTTCAAGTAAGGAATGTTAGAAATGCTAACATGCTTGATGAACCAGCTATTTATTCATCAGAAATGCAAAACTATTCGACTGCTTCAAGGAACGCATTGGAGTATCACCAGCAGGAGCTAGGTGCAGCCGAACCGAGTAACAGGCTGATGATGAATCAGTATGGTTCGTTTCCCCATTCCATGTCTGCTATTCATAAAGAACAGTGTGAGCTTCGTAATTTGGGAAACTGGAGGAACAGTGCCCCACATCAAGGATCTGATTGGTTTGTAAATTATGCAAGCAATGCCACCTCTTTCTTGTCTTCTGAGCTTAACAATGTGTCTGCATACAATGAACTTATGGATAATAATCCTCCTCCTTCATCTCCACTGTATCAGAATGCTTTGCAAGATATTGTCAAGTCTGCTTCTATCACTGGCCAAAGCCAAGACACGATGCAACAAAATGACCACAGCATTTGGCTGGGGAATGCTACTGAAGTTGAGCTTCAACCACCGAGTTATGAAAACCAGCCAAATACATTGCGTTTTGGGTGGACAAATCGAACAACAATTGCTAATTCCGTGAGTGATTCACTTCCTCAGAGCTTATCCTTGTCGCTTTCATCGAATGCACAATCCAAGCCTTGTGTTTCTCAGCTTGAACAAGGGTCTGCATCCAACGATCCTCAATGTTTGAAGTCTATCGTTCCTAGAGATTGTGGGAAATCAATTCAAGACACGGTGGGGATGCCTTCGAAGAGTATTAGTTATCGAAGTGTGGGTCCCCTTGGGCCTTTCACTGGCTATGCTACTATTCTTAAGAGTTCAAGGTTCTTGAAGTCTGCACAACAGTTGTTAGATGAGATTTGTTGTCCATCTGGTGCAAAATTTGCTAAAGCATATGAGAGGGTGTCTCCTGAAGTTAGTGTTTCTACTTCTGCTGATGATGATACTGTTACTGTCAATGAAACTGGGGTTGCTGCAAAAGCTACTAATTCAGGTTTTTCATCATCTATGTTGTATAATATTTCAAAGGAAAATAGTGCTGATCAGAGAGTTGGAATTGGAAGTGGCTTTGGTATTTCCTCGCGGCCAGATTATCAACAGAAGAAAGCAAAGCTCTTGTACATGGAAGAGGAGGTTAGCAGGCAATGCAAGCAGTACCATCTCCAAATGCAAATGGTTGTGTCATCGTTCGAATCAGTGGCGGGTCTTAGTTCTGCTACTCCTTACATCTCCATGGCTCTAAAGTCAGTATCAAAACACTTCAGGTGCCTTAAAAATTCTATCTCAGATCAGCTCAAACTCATAAGCGAAGCCTTGGGAGAGGATTTGTCAATACCCACAAGCAGTACTTGTAGTAAAGCTGACACTAATATGGCAAGGCTAAGATGCATGGACCAAAATCAAAGCTTTCTTCTAAGGAACAAATCTGGCAGGGGTAGTACGGACCTTCTTGAAGCCCAACAGCATGTATGGAGGCCCCAGAGAGGCTTGCCAGAGCGTGCAGTGGCAATTCTGAAAGCCTGGTTATTTGAGCATTTTCTTCATCCTTACCCTACGGACACTGATAAACACATGCTGGCTGGTCAAACAGGTCTTTCACGAAACCAGGTATCAAATTGGTTCATAAATGCCCGAGTCCGGGTGTGGAAGCCAATGGTGGAGGAAATACACATGCTTGAAACAAAAGCACCAGGGTCCAAGGACAAGTGTGGTAAAATGGAGGGAACTTCTTCTGGCACTGAAGGTGATAGCAGCCAGCCTAGAGTAGACAAGCCTTACATTGGTTTGAATTCAATACCCGAAAACCAATTTGAGGGCATGGACATGGGCTCATCCATAGCGGAGGAAAGTAGGTTAAACACAGAACAATGGAGTCAAGAGAAGCGCTCTAAATTGGATTGCCACCAAATGAATTCAAACATGGAGAATACACTGATGGGTTTTGTGCCATACCGACGTGGTGGCCTTGAGGTTGGTGGACTAGGGTCTGTGTCGCTAACATTGGGTCTTAGGCATGGCGTTGAAGCTGTACAACACCAACAACAATTGCAAGAGGAGCAGCTTAGACACCATCTTGGAGGGCACATGATCCATGACTTTGTGGGTTGA 2241 0.4413 MSSLRPESHVAQQIRRDKLRIQNSSQHPHEFPNNLEQLSLQPGFNLDLLQVRNVRNANMLDEPAIYSSEMQNYSTASRNALEYHQQELGAAEPSNRLMMNQYGSFPHSMSAIHKEQCELRNLGNWRNSAPHQGSDWFVNYASNATSFLSSELNNVSAYNELMDNNPPPSSPLYQNALQDIVKSASITGQSQDTMQQNDHSIWLGNATEVELQPPSYENQPNTLRFGWTNRTTIANSVSDSLPQSLSLSLSSNAQSKPCVSQLEQGSASNDPQCLKSIVPRDCGKSIQDTVGMPSKSISYRSVGPLGPFTGYATILKSSRFLKSAQQLLDEICCPSGAKFAKAYERVSPEVSVSTSADDDTVTVNETGVAAKATNSGFSSSMLYNISKENSADQRVGIGSGFGISSRPDYQQKKAKLLYMEEEVSRQCKQYHLQMQMVVSSFESVAGLSSATPYISMALKSVSKHFRCLKNSISDQLKLISEALGEDLSIPTSSTCSKADTNMARLRCMDQNQSFLLRNKSGRGSTDLLEAQQHVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLAGQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKAPGSKDKCGKMEGTSSGTEGDSSQPRVDKPYIGLNSIPENQFEGMDMGSSIAEESRLNTEQWSQEKRSKLDCHQMNSNMENTLMGFVPYRRGGLEVGGLGSVSLTLGLRHGVEAVQHQQQLQEEQLRHHLGGHMIHDFVG 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6030g00004 746 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 191 622 - -
Mupr6030g00004 746 MobiDBLite consensus disorder prediction 608 634 - -
Mupr6030g00004 746 CDD homeodomain 535 596 IPR001356 GO:0003677
Mupr6030g00004 746 FunFam BEL1-like homeodomain protein 9 538 600 - -
Mupr6030g00004 746 SUPERFAMILY Homeodomain-like 537 602 IPR009057 -
Mupr6030g00004 746 Pfam Associated with HOX 314 473 IPR006563 -
Mupr6030g00004 746 ProSiteProfiles 'Homeobox' domain profile. 532 595 IPR001356 GO:0003677
Mupr6030g00004 746 SMART HOX_1 535 599 IPR001356 GO:0003677
Mupr6030g00004 746 Pfam Homeobox KN domain 552 591 IPR008422 GO:0003677|GO:0006355
Mupr6030g00004 746 Gene3D - 538 600 - -
Mupr6030g00004 746 SMART prehox3 309 474 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6030g00004 Mupr-Chr6030 67260 73472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6030g00004 309 625 Homeobox Transcription Factor Family AT2G16400 39.937 1.74e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr6030g00004 POX 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6030g00004 - - gmx:100790583 1071.23