Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6030g00002 ATGAGTATAGGAAGGGGATATGATTCTTGTTCAGCGAAAGAAGGTTCCTCAGAGATGAAAACCAAGAGACATTGTTCCAAGCGCAACAGCAAGGATCGGCACACCAAGGTGAATGGGAGAGACCGTCGTGTTCGTTTATCAACAATCTGTGCTGCTCGTGTCTTCCAACTCACCCGTGAGCTAGGCAACAGAACAGATGGCGAGACCATTGAGTGGCTCCTACGCCAGGCAGAGCCGTCGATTATTGCCGCCACCGGCACCGGCATTTCGCCTTCCAACAACACCTCGCTGCCACCGGACGCAGTTGCTGCTCAGGATGCCAACTTTGTCACTAATGCTGCCTCTGTAAGGACAGAGCAGCATGTTCCACCTTTCGATTTCGACTTTGACTGGTTGGCACACTCCGATTTAGAATTTTTTAATTTATCCAATCAAATTAATGATGGTGACCAAAATGGAGAGGATATGAAGATAAAACTTAAATGCAGTGCCTTAGGTATTGGTGGTACGGATTAA 516 0.4767 MSIGRGYDSCSAKEGSSEMKTKRHCSKRNSKDRHTKVNGRDRRVRLSTICAARVFQLTRELGNRTDGETIEWLLRQAEPSIIAATGTGISPSNNTSLPPDAVAAQDANFVTNAASVRTEQHVPPFDFDFDWLAHSDLEFFNLSNQINDGDQNGEDMKIKLKCSALGIGGTD 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6030g00002 171 ProSiteProfiles TCP domain profile. 30 84 IPR017887 -
Mupr6030g00002 171 Pfam TCP family transcription factor 29 98 IPR017887 -
Mupr6030g00002 171 MobiDBLite consensus disorder prediction 1 39 - -
Mupr6030g00002 171 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 111 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6030g00002 Mupr-Chr6030 29860 31075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6030g00002 10 97 TCP Transcription Factor Family AT1G69690 62.500 3.94e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr6030g00002 TCP 2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6030g00002 - - pvu:PHAVU_005G132500g 182.185