Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr602g00001 ATGAATCAAAATAATACAAGGCAGAGTCCAGAAGAAAACATAGCCTGCCCAGCGCCGCACTTTGGATATCAAACTGGAGATAACCCTAAAAATCAAACTCTCTCCCTCACCGACTCTGCCTCCGTAACCGAGAACACCGGGGTAGTTACAGTCATGGCGGACGTGATGATCATGAAAGAGATCGAAGACACGGCGCTGCGTCTCGGCGTTGATCTTTCCACTCTCGATCTCGACGCCATTCGCCTCCCGCCGGGAGAAAATTGCGGCATCGACAGTGATGATGAGGAAATTTATCAGGAGGATAATCTCGAGTACGAGTCTGGATTTGGCAACATTATAGTCGTGGATAACCTCCCCGTGGTTCCGAGAGAGAAGTTCGACAAGCTTGAAGGAGTGGTTCGCAAAATTTATAGTCAGATTGGTGTCATTAAGGACGACGGCCTTTGGATGCCGGTTGATCCTGAAACTGAGAAAACCCTAGGTTACTGCTTCATTGAGTACAATACCCCTCAGGAAGCGGAGCTTGCAAAAGAGAAGACTCATGGCTACAAATTGGACCGAGCACACATATTTGCTGTGAGCATGTTTGATGACATCGACAGATTCATGAAAGTTCCAAATGAGTGGGCTCCTCCTGAAACTAAGCCATATGCTCCAGGGGAAAATCTTCAACATTGGCTCACTGATGCAAAGGCCAGGGACCAGTTTGTGATTCGTGCTGGTTCAGATACCGAGGTTTTGTGGAATGATGCAAGGCATTTAAAGCCTGATCCAGTTTATAAACGTGCATTTTGGACTGAGAGTTTTGTACAATGGTCTCCCCTTGGGACATACTTGGCCACTGTTCACAGACAAGGAGCTGCAGTCTGGGGAGGTGCTTCCAGCTTTAATAGACTTATGCGATATGCACATCCTCAGGTAAAGCTTATTGATTTTTCTCCTGGTGAGAAGTATTTGGTAACTTATAGCAGCCATGAACCAAGCAATCCTCGTGATGCTAATAGGGTTGTGATAAATATATTTGATGTGAGGACTGGTAAGGTGATGAGGGATTTTAAAGGAAGCGCTGATGATTTTGCAGTTGGAGGTGCTGGGGGTGTTACTGGGGTGTCATGGCCTGTTTTCAAATGGAGTGGTGGAAGAGATGATAAATACTTTGCAAGGATGGGGAAAAATATACTCTCTGTATACGAGACAGAGACCTTTTCTCTTGTTGACAAGAAGTCCTTAAAGGTTGAAAATATAATGGATTTCAGCTGGTCTCCAACTGATCCAATTATTGCTCTCTTTGTTCCTGAGATGGGAGGTGGTAACCAGCCTGCTCGGGTAAGTCTGATCCAAATCCCCAGCAAAGAGGAACTCAGGCAAAAGAACCTTTTCAGTGTCAGTGACTGCAAGATGTACTGGCAAAGCAATGGAGATTACCTTGCTGTTAATGTGGATAGGTACACAAAAACGAAAAAAAGCACCTATACAGGCTTTGAGCTTTTCCGTATAAAAGAACGGGATATACCAATTGAAGTTTTGGAGCTTGAGAATAAGAATGACAAAATCATTGCCTTTGCTTGGGAGCCAAAAGGACACAGGTTTGTGGTTATTCATGGTGATAACCCCAAGCCTGATGTTAGCATTTACTCCATGCGGACAGCTCAGAACACTGGCCGAGTTTCAAAACTCACTACTCTGAAAGGCAAGCAAGCAAATGCTCTATTTTGGTCACCTGCAGGTCGCTACATTGTACTAGCTGGGTTGAAAGGCTTCAATGGACAATTGGAATTTTACAATGTTGATGAACTTGAAACCATGGCTACTGCTGAACATTTTATGGCAACAGATATTGAATGGGATCCAACTGGAAGGTATGTTGCAACTGCTGTGACTTCAGTTCATGAAATGGAAAATGGTTTCAATATATGGTCATTCAATGGCAAGCATCTGTATCGGATTCTGAAGGATCACTTCTTTCAGTTCTTATGGCGACCAAGGCCACCATCTTTCTTGAGTCCTGAGAAAGAGGAAGAGATTGCCAAGAACTTGAAGAAGTATAGTAAGAAATATGAGGCAGAAGATCAAGATGTTTCGCTGCTGCTGAGTGAGCAAGAGCGTGAGAAGCGTAGGATGCTGAAAGAAGAGTGGGAAAAATGGGTTAATGAATGGAAGCTTATGCACGAAGATGAGAGTTTACAGAGGCAAAAGCTTAGGGATGGAGAAGCTAGTGACGAAGAGGAGGAATACGAGGCAAAGGACATCGAAGTGGAGGAAGTGATCAATGTAACAGAAGAAGTCCTTCACCTTGAGTATGGCCAAGAATGA 2313 0.4431 MNQNNTRQSPEENIACPAPHFGYQTGDNPKNQTLSLTDSASVTENTGVVTVMADVMIMKEIEDTALRLGVDLSTLDLDAIRLPPGENCGIDSDDEEIYQEDNLEYESGFGNIIVVDNLPVVPREKFDKLEGVVRKIYSQIGVIKDDGLWMPVDPETEKTLGYCFIEYNTPQEAELAKEKTHGYKLDRAHIFAVSMFDDIDRFMKVPNEWAPPETKPYAPGENLQHWLTDAKARDQFVIRAGSDTEVLWNDARHLKPDPVYKRAFWTESFVQWSPLGTYLATVHRQGAAVWGGASSFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRDFKGSADDFAVGGAGGVTGVSWPVFKWSGGRDDKYFARMGKNILSVYETETFSLVDKKSLKVENIMDFSWSPTDPIIALFVPEMGGGNQPARVSLIQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVNVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFVVIHGDNPKPDVSIYSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEREKRRMLKEEWEKWVNEWKLMHEDESLQRQKLRDGEASDEEEEYEAKDIEVEEVINVTEEVLHLEYGQE 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr602g00001 770 FunFam Eukaryotic translation initiation factor 3 subunit B 106 205 - -
Mupr602g00001 770 FunFam Eukaryotic translation initiation factor 3 subunit B 232 433 - -
Mupr602g00001 770 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 111 198 IPR000504 GO:0003723
Mupr602g00001 770 Gene3D - 232 433 IPR015943 GO:0005515
Mupr602g00001 770 Gene3D - 106 205 IPR012677 -
Mupr602g00001 770 SUPERFAMILY DPP6 N-terminal domain-like 269 652 - -
Mupr602g00001 770 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 99 764 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr602g00001 770 Gene3D - 465 668 IPR015943 GO:0005515
Mupr602g00001 770 PIRSF Transl_init_eIF3b 58 765 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr602g00001 770 SMART rrm1_1 112 193 IPR000504 GO:0003723
Mupr602g00001 770 CDD RRM_eIF3B 110 194 IPR034363 -
Mupr602g00001 770 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 83 761 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr602g00001 770 Pfam Eukaryotic translation initiation factor eIF2A 457 657 IPR013979 -
Mupr602g00001 770 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 133 187 IPR000504 GO:0003723
Mupr602g00001 770 SUPERFAMILY RNA-binding domain, RBD 101 191 IPR035979 GO:0003676
Mupr602g00001 770 MobiDBLite consensus disorder prediction 728 749 - -
Mupr602g00001 770 FunFam Eukaryotic translation initiation factor 3 subunit B 462 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr602g00001 Mupr-Chr602 3339 7890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr602g00001 56 764 Eukaryotic Initiation Factors Gene Family AT5G27640 76.620 0.0 1183