Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6013g00001 ATGGTGCAGCCAGAGGATCTGCAGTTCCCATGGTCTTCTTCTGAAGACATGAACTCAACTTTTGATCAAGATGTTGAGTCCTATGGCTTCACCATGTATGACCATGTTGGTGATTATGGACCCTATGGCTTCACCATATATGACCATGTTGGGGGTTGTGGACCCTATGGCTTCACTATGGATGATGACCATATTGGTGATTGTGGACTCAATACTCTATTGAGCACTCTAGAGGATTCTTCTTCAGAAGTTTGTTCCATCCCCTTTCCCTCCTCCCCCATATTCCCCAATGATTATGTCCAATACTCAATCAATGAAGAAACCTTGGAACTTCCACCACTGATGGAATTGGATGATTTTGATTGCATCCTGAGTGCTCAAATTCCTAGTACTCAAGGCCATGGAGAGTGTGAAGGGAGCTTCTTCCCTTCACAAAATTTGTCCAGTGAGGTGGAAAATGATGCATGGAGTCCTAGCCCATCTGTGAAGTCAGAGTTGTCCTCAATTCAAACCTCACCATTGACTTTACCACAAGAAAACATGGAAATTGAAAACCAAGTGAGCCTTCCACACTTGATGGAGGCATGTGGAGAGGCCTTGGAGCAAGGGCAAAAAGCACTAGCAGAAGTGATTTTGAGGTGCATGAGCCAGAAAGCTACTCCACTTGGTGAATCTCTAGAGAGGCTTGCATTCTACATGTCTCAAGGCATGACAAATCATGGAGACTATCTCAAAGGGGAGGCCTTCAAGAACTTTGAGGCTGCCCAGAGGGCACTCTATCAAGGCCTCCCAATTGGGAAAATTGCTCACTTTGCAGCTGTTTCAGCAATTATTGAAGCCATGCCACAAGATTGTGAGGTTGTACACATAGTGGACTTTTGTATTGGACTTGGGGTCCAATGGCCTGCAGTGTTTGAGGCTATTGCACACATGCACAAAACATTGAAATTGACATCAATCAAATGGGGTGATGAGGATCCTGAATGTGTTTCTAGTCCATGCAACTTTGAGGAAACTAGAAGGCAGCTCTATGAGCATGCCAAATCCTGTGGTTTGAAGTTGAAGGTGGAGGAGAAAAGAGTGGAGGAACTTGTTACTGAGATCAAGAAAATGAACAAAAGGGGTGGGAGAGGAGAGTTTTTGGCCTTCAATATAATGACTGGTCTTCCACATATGAGAAGGGTAAGGAGCAGAAGACATGCCTTAGAGTTTCTAAGGGTAGCTGAGGATTTAATCAAAAGCTCTGGCAACAGGGGAATCATCACCTTTGGAGATGGGGCTGCTTTTGAGAAAGTGAAAAACAACTTGAATTTCAGGTCATTTTTTAATGGACACTTGGAACATTACCATGCCTTGTTACAATCAATTGAATCACATTTCCCAACTCATTTCTCAGAAGCAAGACTTGCCATGGAGCAGTTATTTTTGCAACCTTGTATCTCTTCTCTTGATTGGTTACAAACATGGGAGGAGATGAAAAGGGGTGGCCATCTTGAGGCAGAGATTAGCTTGGAGGGTTGCAAATTGACCAATAATATTTTAATGGAAATCAGAGAAGTGTTGAGAGGAAGTGAAGGTTCATATCAGGCCAGGATTGAAGGACAACATGACAATGAACTAGTTTTGGAGTGGAAAGGAACTCAACTATTAAGATTTTCAACTTGGAAAAATTAA 1674 0.4301 MVQPEDLQFPWSSSEDMNSTFDQDVESYGFTMYDHVGDYGPYGFTIYDHVGGCGPYGFTMDDDHIGDCGLNTLLSTLEDSSSEVCSIPFPSSPIFPNDYVQYSINEETLELPPLMELDDFDCILSAQIPSTQGHGECEGSFFPSQNLSSEVENDAWSPSPSVKSELSSIQTSPLTLPQENMEIENQVSLPHLMEACGEALEQGQKALAEVILRCMSQKATPLGESLERLAFYMSQGMTNHGDYLKGEAFKNFEAAQRALYQGLPIGKIAHFAAVSAIIEAMPQDCEVVHIVDFCIGLGVQWPAVFEAIAHMHKTLKLTSIKWGDEDPECVSSPCNFEETRRQLYEHAKSCGLKLKVEEKRVEELVTEIKKMNKRGGRGEFLAFNIMTGLPHMRRVRSRRHALEFLRVAEDLIKSSGNRGIITFGDGAAFEKVKNNLNFRSFFNGHLEHYHALLQSIESHFPTHFSEARLAMEQLFLQPCISSLDWLQTWEEMKRGGHLEAEISLEGCKLTNNILMEIREVLRGSEGSYQARIEGQHDNELVLEWKGTQLLRFSTWKN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6013g00001 557 ProSiteProfiles GRAS family profile. 180 556 IPR005202 -
Mupr6013g00001 557 Pfam GRAS domain family 191 556 IPR005202 -
Mupr6013g00001 557 Coils Coil 354 374 - -
Mupr6013g00001 557 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 170 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6013g00001 Mupr-Chr6013 8945 10618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6013g00001 177 556 GRAS Transcription Factor Family AT5G66770 24.627 1.16e-15 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr6013g00001 GRAS 4.2e-38 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6013g00001 - - gmx:100792407 857.055