Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6008g00003 ATGTCTGGCGGGCCGAGGCCCAGCCCAAAAGGAAAGTCGGCAACGAAAGGGGGAAGAAAGAAAAGCAGAACGCCGTCGTGTCGACCCTCCCAATCCAATTATTTCCGTTCCTACAAAAACACGCGGCAATTGAAACCAATCACCTTCACCTCCTTCAAACACACTCTTTCACACCCTCACACTCTTTACGTGAAAACCAGAAGAAACCCTAACAATTCCAATCCAATGACTCCTCGCGTCGACGATTACGAAAAGGACAATCTCTCCGCCACCGACGACGACGACGACGACGACGACGGCCTCAAGGAAGACATGGCCGCGCTCGCCCGAGCCTGCCTCATCGGCGCCCCGCGCGCCGACGATAGCGTTCCGACGGAGGACCCGCTCCTGGACGCCGGTGACGCCGTCGTTCCCGCTGCCACCGACTCCGACGACGACCAGGACGACTTCGAATGTCTTAAGAGAGTGCAGAGCCTCTACACGCCTCTGTCCTCTCTTCCGCCGCTGCCGCCGGAGCCGGCTGTGTCCGACGATGATGACGTGGACGACCTTGAGACGGTGCGCGCCATTATGAGACGGTTAAATACCTACGGCGAAGGTCCTCATGAAGGTGGAATGGAAACTCTGGCAGATGAGGGGGATCAGACCTCCAGCCCTGGCTGTGGTGGTGACATTGCTAATGGCTCAATACATTACGAATCAGATGGTGGTGAATTATGTCCTGTTTCTCAAGATCCTAATGAGGCTGCTACTAAGGAGTTGGCTGAGAACATTGAAATGCAGCTTAGTGATTTTGTCGAGAGTTCTGAACCTGATGCCTGCGAGTCATCCAAATTACCACAGAAAAGAATGAGCTTTCCTCCTGCAGTTGAGACTTTTGTTGATGCCATCAAGAAAAATAGGGATTTGCAGAGATTTCTGAGAAGTAAGTTGATTGCTCTTGAGGCTAAAATTGAGGAAAACAAACAAATAAGGAACAAAATTAAAATTCTTAAGGACTTCCAGGCTTCATGCACTAGAAGAACAGGGAGTGCGTTGTCACTGAAAAAGGATCCATGTGTTCAGTTAATATCAGCAAAAAAGTCTTCTGCGCCAAAGAACACTAAGAAACATAAAAAAGTATCTGCAATGTGTTATGGCCCAGAAGAGAATTCTCGTGTCGCTAATTATAGGATGGTGTTGGAAAGATATCCACTTTCATTGGATCGGAAAAAATGGTCTAATGTAGAAAGGGAAAATCTTTTGAAGGGAATTAAGCAACAATTCCAAGAAATGGTGCTTCAAGTTTCAGTCGATAGAATAAGTTCAGAGGGCTCATTTGGAGATGCAAATGACATGGATAATATACTTGCATCCGTTAGAAATCTTGAAATCAGACCGGAGAGGATTAGGGAATTTTTACCTAAAGTTAATTGGGATCAGTTAGCTTCCATGTATGTTGCTGGCCGTACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTGTGAAGATCCTTTGATCAACCAAGGTTCATGGACTAATGAAGAGGACAGGTCTCTTTTACTTATTGTCCAAGATATGGGCATCAGGAACTGGTTTAATATTGCTGCATCATTGGGCACAAGCAGGACTCCATTTCAATGCTTGGCACGATTCCAAAGGAGCTTAAATCCTTCCATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTCTGTTCTGCTGTGGCATGTTTTGGTGATAGCAATTGGCAGTCTGTGGCTTCTGTTTTAGAACGGCGGACGGGAACGCAGTGCTCAAATAGATGGAAAAAAGCCCTTTGTCCCGAGAGGAAAGGGAGCTTTACACGTGATGAGGATATACGCTTAACAGTAGCAGTCATGCTTTTTGGACGGAAATGGAACCTAATAGCTAAATATGTTCCTGGACGGATCCAATCTCAGTGTAGGGACAGATACCTCAATAGTCTGGATCCTTCTTTGAAATGGGGTGGATGGACCGAGGAAGAGGATTTAAGATTAGAAGCTGCAATTGCCAAGCATGGATACTGCTGGTCTAAGATTGCTGAAGAAGTGCCTCCCCGGACTGATTCTCAATGCCGAAAGAGATGGAAGGTGTTATGTCCTGAACAAGTTCCCTTGCTTCAAGAAGCAAAAAAGAAGCAAAGGTCTATTATTGGCAGTAACTTTGTTGATCGAGAATCTGAACGCCCAACCATTACACTGGATGACTTTCTGCCATTGCGGGCGCTAGCTCCAAAATCTGATGTTGGTGCTTCAAATCTCCGCAAGAAGGACAAGTCAAGCATTGTTCCCAAGAAAATGAGTTCTAAAAAACGTGCAAAAAGAACTCGACTTCGTACCAAGGAAGTACAGGATACAGAGGTAAATTGTGATGATGAGATCAAGACTTGTGGTGAAGAAGTCCAAGTCTCTGCATGCAGCAATGTTGGCAAGAGGATGAGGTTCAAAAGACGTGCAAATAACACTCGAAGTTGTCCCAAGGAAGTAGTGGAGACAACATGTAGTGACATGGTCAAGACTTGTATTGAGAGTTCAGAAAGTCAAGATTCGGATGACATGACTCTCGCATGCTTTTTACGCAACATATCAAAGAAGAGACTATCTATATGCACCAAAAATTTGAGTCAGGCTGAAAGTCAAGATCCATATGATGAGCATAGTGGCTTGTCTCAGTCATGTGATACGGTTGGAACTGAAGATTTGTTCGTGCAGCAGAATGTTGTTCCTGACAGACAAGTGGGAAAACCAGACGATGAAGATATGACCCTTTCTTGCTTTCTGGGAAACAAACAAAAGAAAGGGAGTCAAGCTGCTAAACGACGTGGTGCACGCTCTTCTTCCAAATTGAAAAAGGGATCTGCATTACTACGTGAAGAGCATTGTGCAAGCAAGCCAACCATCATATCTAACGACATTGGACCGGCAATGTCAAAGCATGTTGAAGAGGAGACTGTTTTGCATGGTGGTGTGGCTGAACCCACGGACATCATTGTGGAAGAAAAAGATGATGGCCTGTGCTCTTCCTTATTGCAAAACAGACCTAAGAGACAGCGAAAACTACCCAGTAGGTACAGCGAGTTTCGAGTTCATCATGCTGAGCTTGGGCCTGTATACAGATTTTCGGCCTGGCACATTATATCTCAGTCATCAACTGTTAAACTCAAA 3171 0.4554 MSGGPRPSPKGKSATKGGRKKSRTPSCRPSQSNYFRSYKNTRQLKPITFTSFKHTLSHPHTLYVKTRRNPNNSNPMTPRVDDYEKDNLSATDDDDDDDDGLKEDMAALARACLIGAPRADDSVPTEDPLLDAGDAVVPAATDSDDDQDDFECLKRVQSLYTPLSSLPPLPPEPAVSDDDDVDDLETVRAIMRRLNTYGEGPHEGGMETLADEGDQTSSPGCGGDIANGSIHYESDGGELCPVSQDPNEAATKELAENIEMQLSDFVESSEPDACESSKLPQKRMSFPPAVETFVDAIKKNRDLQRFLRSKLIALEAKIEENKQIRNKIKILKDFQASCTRRTGSALSLKKDPCVQLISAKKSSAPKNTKKHKKVSAMCYGPEENSRVANYRMVLERYPLSLDRKKWSNVERENLLKGIKQQFQEMVLQVSVDRISSEGSFGDANDMDNILASVRNLEIRPERIREFLPKVNWDQLASMYVAGRTGAECESRWLNCEDPLINQGSWTNEEDRSLLLIVQDMGIRNWFNIAASLGTSRTPFQCLARFQRSLNPSMLNSEWTEEEDAQLCSAVACFGDSNWQSVASVLERRTGTQCSNRWKKALCPERKGSFTRDEDIRLTVAVMLFGRKWNLIAKYVPGRIQSQCRDRYLNSLDPSLKWGGWTEEEDLRLEAAIAKHGYCWSKIAEEVPPRTDSQCRKRWKVLCPEQVPLLQEAKKKQRSIIGSNFVDRESERPTITLDDFLPLRALAPKSDVGASNLRKKDKSSIVPKKMSSKKRAKRTRLRTKEVQDTEVNCDDEIKTCGEEVQVSACSNVGKRMRFKRRANNTRSCPKEVVETTCSDMVKTCIESSESQDSDDMTLACFLRNISKKRLSICTKNLSQAESQDPYDEHSGLSQSCDTVGTEDLFVQQNVVPDRQVGKPDDEDMTLSCFLGNKQKKGSQAAKRRGARSSSKLKKGSALLREEHCASKPTIISNDIGPAMSKHVEEETVLHGGVAEPTDIIVEEKDDGLCSSLLQNRPKRQRKLPSRYSEFRVHHAELGPVYRFSAWHIISQSSTVKLK 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6008g00003 1057 Pfam Myb-like DNA-binding domain 659 700 IPR001005 -
Mupr6008g00003 1057 Pfam Myb-like DNA-binding domain 606 649 IPR001005 -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 751 781 - -
Mupr6008g00003 1057 CDD SANT 608 651 IPR001005 -
Mupr6008g00003 1057 Gene3D - 402 498 - -
Mupr6008g00003 1057 Gene3D - 499 549 - -
Mupr6008g00003 1057 Gene3D - 605 657 - -
Mupr6008g00003 1057 ProSiteProfiles Myb-like domain profile. 497 549 IPR001005 -
Mupr6008g00003 1057 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 497 549 IPR017930 -
Mupr6008g00003 1057 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 550 605 IPR017930 -
Mupr6008g00003 1057 ProSiteProfiles Myb-like domain profile. 605 651 IPR001005 -
Mupr6008g00003 1057 SUPERFAMILY Homeodomain-like 630 703 IPR009057 -
Mupr6008g00003 1057 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 92 889 - -
Mupr6008g00003 1057 CDD SANT 557 599 IPR001005 -
Mupr6008g00003 1057 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 606 651 IPR017930 -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 58 78 - -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 753 767 - -
Mupr6008g00003 1057 Gene3D - 659 705 - -
Mupr6008g00003 1057 ProSiteProfiles Myb-like domain profile. 652 702 IPR001005 -
Mupr6008g00003 1057 ProSiteProfiles SANT domain profile. 660 703 IPR017884 -
Mupr6008g00003 1057 SUPERFAMILY Homeodomain-like 553 647 IPR009057 -
Mupr6008g00003 1057 SMART sant 554 603 IPR001005 -
Mupr6008g00003 1057 SMART sant 656 704 IPR001005 -
Mupr6008g00003 1057 SMART sant 605 653 IPR001005 -
Mupr6008g00003 1057 SMART sant 501 551 IPR001005 -
Mupr6008g00003 1057 SMART sant 402 498 IPR001005 -
Mupr6008g00003 1057 CDD SANT 504 549 IPR001005 -
Mupr6008g00003 1057 Pfam Myb-like DNA-binding domain 505 566 - -
Mupr6008g00003 1057 ProSiteProfiles Myb-like domain profile. 550 601 IPR001005 -
Mupr6008g00003 1057 Gene3D - 556 604 - -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 58 101 - -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 932 953 - -
Mupr6008g00003 1057 CDD SANT 660 701 IPR001005 -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 87 101 - -
Mupr6008g00003 1057 SUPERFAMILY Homeodomain-like 478 546 IPR009057 -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 24 40 - -
Mupr6008g00003 1057 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 652 706 IPR017930 -
Mupr6008g00003 1057 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6008g00003 Mupr-Chr6008 17075 24061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6008g00003 279 802 MYB-Related Transcription Factor Family AT3G18100 49.536 5.31e-168 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6008g00003 Myb_DNA-bind_6 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6008g00003 K09422 - gmx:100818474 1399.8