Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6007g00003 ATGGTGTTGGGATGGAGAAGGAGGAAGAACAACAACAACAACCGCAAAGGTGGAAAACCCATGATGGAGTTGGTGGTTCCCAACCACTTCAGGTGTCCAATTTCTCTTGACTTGATGAAGGATCCTGTGACACTCTCAACTGGGATCACCTATGATAGAGAGAGTGTGGAGAGGTGGTTTGATGAAGGGAACATTACTTGTCCTGTTACCAACCAGGTTGTGAGGAACTTTGACATGATTCCAAACCATTCCCTTAGGATAATGATTCAAGATTGGTGTGTGGAGAATAGGCAACATGGGGTTGAGAGGATTCCAACTCCAAGGATACCTGTTAGCCCAACTGATGTTGCTGAGCTTCTCATGCAAGTGAAGGCTTCAGCGAGGGGTTTGGATTCCTATGGCTGCCTTGAATTGGTGCGGAAGATGGAGAGGTGGGGTGGTGAGAGTGAGAGGAACAAGAGGTGCATAGTGGACAATGGAGCACCAGTGACATTGGCTTCATCATTTGATGCTTTTGCAAATGATTCGGTTGAGAGGAATGTGGTTGTTCTTGAGGAGATTTTGTCTGCTCTCAATTGGATGTTTCCTCTTCAATTGGAGGCACAGAAATCTTTGGGGTCTTTGGCTTCTCTACGTTGCATGGTTTGGTTCTTGAAGCACCAAGATCTCTCAGGGAAGGAGAAGTCCATTGTGGCATTGAGGGAGCTTCTTTCCTTTGGTGATGAGGAGCATGTGGAGGCCTTGTCTAAAATTGAAGGGGTCAATGAGCTCTTGGTGGAGTTCATCAACAAGAGGGTTAGTCCAACCATCACAAAGGCCTCATTGAGGGTGGTTTGGTACTTGGTCTCATCCTCTTCCAACTCAAGTGAGAGGATGAGGCTAACATTTGTTGAATTGGGTTTGGTTTCTTCTTTGCTTGACATTCTCATTGACTCAGACAAAAGCCTTTGCGAGAAGGCCATGGCCATTTTGGACTCTCTATGCAGCTGCGAGGAAGGGAGGGACAAGGCTTGTGGGAATGATCTAACAATCCCTCTTTTGGTGAAGAAAATTCTGAGGGTTTCACCATTGACCACAGACTATTCTGTTTCTGCCATTTGGAAGCTTTGCAAGTTTGGAGAAAAACATGAAGGGAGAGCCCTTGTTGAGGCCCTTCAAGTTGGTGCCTTTCAGAAGCTCTTGTTGGTGTTGCAAGTTGGTTGTGGTGATGAGACTAAGGAGAAAGCAACTGAGCTTCTCAAATTGCTCAATCCTTACAGGGATGAATTGGAATGCATAGACTCAGATTACAAGAATTTATCATAA 1305 0.4559 MVLGWRRRKNNNNNRKGGKPMMELVVPNHFRCPISLDLMKDPVTLSTGITYDRESVERWFDEGNITCPVTNQVVRNFDMIPNHSLRIMIQDWCVENRQHGVERIPTPRIPVSPTDVAELLMQVKASARGLDSYGCLELVRKMERWGGESERNKRCIVDNGAPVTLASSFDAFANDSVERNVVVLEEILSALNWMFPLQLEAQKSLGSLASLRCMVWFLKHQDLSGKEKSIVALRELLSFGDEEHVEALSKIEGVNELLVEFINKRVSPTITKASLRVVWYLVSSSSNSSERMRLTFVELGLVSSLLDILIDSDKSLCEKAMAILDSLCSCEEGRDKACGNDLTIPLLVKKILRVSPLTTDYSVSAIWKLCKFGEKHEGRALVEALQVGAFQKLLLVLQVGCGDETKEKATELLKLLNPYRDELECIDSDYKNLS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6007g00003 434 MobiDBLite consensus disorder prediction 1 20 - -
Mupr6007g00003 434 Gene3D - 207 427 IPR011989 -
Mupr6007g00003 434 ProSiteProfiles U-box domain profile. 25 99 IPR003613 GO:0004842|GO:0016567
Mupr6007g00003 434 PANTHER WDSAM1 PROTEIN 22 418 IPR045185 GO:0061630
Mupr6007g00003 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 104 IPR013083 -
Mupr6007g00003 434 FunFam RING-type E3 ubiquitin transferase 26 97 - -
Mupr6007g00003 434 CDD RING-Ubox_PUB 27 79 IPR045210 -
Mupr6007g00003 434 SMART Ubox_2 29 92 IPR003613 GO:0004842|GO:0016567
Mupr6007g00003 434 SUPERFAMILY ARM repeat 152 415 IPR016024 -
Mupr6007g00003 434 Pfam U-box domain 26 97 IPR003613 GO:0004842|GO:0016567
Mupr6007g00003 434 SUPERFAMILY RING/U-box 23 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6007g00003 Mupr-Chr6007 20569 22967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6007g00003 5 428 U-box Gene Family AT5G37490 43.953 7.47e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6007g00003 - - gmx:100794340 741.88