Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6004g00001 ATGACCCATCATAATAAGGTCATGCTCTTGGGACACAGCGACTCCTACACACAAGACAAGGACATGCAGGTTACCGTAGCCTTCAACCATTTCGGAGAAGGTCTTGTCCAAAGAATGCCAAGCTGTAGGCACGGGTATTTTCATGTGATTAACAATGACTATATTCAGTGGAAAATGTACGGGGATGGTGGAAGTGCCGACCCTACCATTAATAGCCAAGGGAACATGTTTGTTGCACCAGACAACAGATTTAGCAAGGAGGTAACCAAGCACGAGGATGCATAA 285 0.4561 MTHHNKVMLLGHSDSYTQDKDMQVTVAFNHFGEGLVQRMPSCRHGYFHVINNDYIQWKMYGDGGSADPTINSQGNMFVAPDNRFSKEVTKHEDA 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6004g00001 94 PANTHER PECTATE LYASE 18-RELATED 1 93 IPR045032 GO:0030570
Mupr6004g00001 94 PRINTS Pollen allergen Amb family signature 38 57 IPR018082 -
Mupr6004g00001 94 PRINTS Pollen allergen Amb family signature 60 79 IPR018082 -
Mupr6004g00001 94 Gene3D - 1 94 IPR012334 -
Mupr6004g00001 94 SUPERFAMILY Pectin lyase-like 2 88 IPR011050 -
Mupr6004g00001 94 Pfam Pectate lyase 2 77 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6004g00001 Mupr-Chr6004 7317 8701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6004g00001 1 94 Polysaccharide Lyase AT4G24780 80.851 3.97e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6004g00001 K01728 - rcu:8266390 181.8