Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5996g00002 ATGTCACTTTCGGAGTTTAACTCCAAGATGATTAGATCTTTGTTGTCCCTCCTTTTGACTGGAACAGGGGTCATAGCCATGTTTTGCAATTGTTTTGGTGCTTTGAATTGGTGTGGAAGGAGGGATGATCCTGCAGACCAACCACATGAACAAGTGATTGCAACTAAAAAGTTTAGCTATAACTCATTGAGATCAGCAACAGGAGATTTTCATCCTTCAAGCAAAATTGGTGGAGGAGGTTATGGAGTAGTCTACAAGGGAGTTTTAAGGGATGGTACTCAGGTTGCTATCAAGTCTCTTTCCGTAGAGTCTAAACAAGGAACCCGTGAATTTATGACAGAAATTGATATGATATCAAATATACGACATCCAAATCTTGTGGAACTGGTTGGCTGCTGTGTTGAGGGTAGTCATCGAATATTAGTTTATGAATTCTTGGAGAACAATAGCCTTGCAAGTTCTTTACTTGATTCAAAAAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATTTGTTGTGGCACAGCTTCTGGTCTAAGTTTTCTTCATGAAGAGGCTCAACCAAACATTGTTCACAGGGATATCAAGGCCAGCAACATATTACTCGATGGGAACTTTAACCCGAAAATTGGGGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACCCATGTTAGTACTCGAGTTGCAGGAACTGTGGGATATCTTGCACCAGAATATGCACTTATGGGACAACTTACAAAGAAGGCAGACGTGTACAGTTTTGGGATTCTCATGCTTGAAATAATCAGTGGGAAAAGTAGTAGCATAGCTGCATTTGAAGAGGATTATTTGGTTTTGGTGGAATGGGCTTGGAAGCTAAAAAGAGAAAACAGGCTTCTGGACCTTGTTGATTCAGAACTGAGTGAATATGATGAGAGCGAGGTGTATCGGTTCCTTATGGTGGCTCTATTTTGCACCCAATCAGCTGCTCAGCATAGACCGAGCATGAAGCAAGTATTGGAAATGCTTTCTAAGGAAGTTCATCTTAATGAGAAGGCATTGACTGAGCCTGGAATATATAGATGGCACAGCACTGGAAAGAAGGGTGGTTCTTTGAATGAGACATCATCTTCTCAACCCTTCAAGTACAAAAGAACTGAAAATCCACATGAAGCAACTTCAACCCACTTTAGTGGTACAGATATTGTGACTGAGATGCTTCCAAGCTGTTAA 1224 0.4093 MSLSEFNSKMIRSLLSLLLTGTGVIAMFCNCFGALNWCGRRDDPADQPHEQVIATKKFSYNSLRSATGDFHPSSKIGGGGYGVVYKGVLRDGTQVAIKSLSVESKQGTREFMTEIDMISNIRHPNLVELVGCCVEGSHRILVYEFLENNSLASSLLDSKSKYVALDWPKRAAICCGTASGLSFLHEEAQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALMGQLTKKADVYSFGILMLEIISGKSSSIAAFEEDYLVLVEWAWKLKRENRLLDLVDSELSEYDESEVYRFLMVALFCTQSAAQHRPSMKQVLEMLSKEVHLNEKALTEPGIYRWHSTGKKGGSLNETSSSQPFKYKRTENPHEATSTHFSGTDIVTEMLPSC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5996g00002 407 MobiDBLite consensus disorder prediction 365 380 - -
Mupr5996g00002 407 MobiDBLite consensus disorder prediction 362 392 - -
Mupr5996g00002 407 CDD STKc_IRAK 89 342 - -
Mupr5996g00002 407 ProSiteProfiles Protein kinase domain profile. 70 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5996g00002 407 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 34 364 - -
Mupr5996g00002 407 FunFam cold-responsive protein kinase 1 41 145 - -
Mupr5996g00002 407 FunFam Putative LRR receptor-like serine/threonine-protein kinase 146 352 - -
Mupr5996g00002 407 Gene3D Phosphorylase Kinase; domain 1 40 145 - -
Mupr5996g00002 407 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Mupr5996g00002 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mupr5996g00002 407 Gene3D Transferase(Phosphotransferase) domain 1 146 354 - -
Mupr5996g00002 407 SMART serkin_6 70 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5996g00002 407 SUPERFAMILY Protein kinase-like (PK-like) 49 340 IPR011009 -
Mupr5996g00002 407 Pfam Protein tyrosine and serine/threonine kinase 73 340 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5996g00002 Mupr-Chr5996 9244 15501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5996g00002 18 355 Receptor kinase-like Gene Family AT1G56120 48.830 5.41e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr5996g00002 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5996g00002 - - gmx:100785766 695.656