Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr598g00003 ATGAGTTTTCAAGACATCCAAGGCGGGTCCAACCCTCCCTCTCGCCGGAGCCAGTCGCCGTCGCAGGCCGTCGCCGCCGGAATTTTCCAGATCAACACCGCCGTCGCTACTTTCCGGCGCCTCGTCGATGCCGTTGGAACCGTTAAAGACACTCCCGAACACCGTCAGAAGCTGCACAATACGAGGCAGAGGATATTGCAGCTTGTTAAGGAGACTTCTGCTAAGCTCAAATCCTTGACAGAATCTGATCGTGATGCTAATGCCAATGCTAGTAAAAAAATTGAGGATGCTAAGCTTGCAAGAGATTTCCAAACCATATTGCAAGAGTTCCAGAAAGTACAACAGCTTGCTTCTGAGCGCGAATCGACTTACACCCCTGCTACCCCTTCTTTACCAACAAGCTCTCACTCTGGTGAGGAATCGGTTGGGATAGATGTGGAGAGCCAACCTTTTATCAGAGAGCAGAAGAGGCAAGAGATACTTCTATTGGATAATGAAATATCCTTCAACGAGGCCATGATTGAAGAAAGAGAACATGGAATTAGAGAGGTAGAAGAGCAAATTGGACAAGTAAATGAAATATTCAAGGACCTAGCTGTTCTGGTTCATGATCAGGGTGTTATTATTGATGACATTCAATCAAATATTGATGCTTCCGCTGGTGCAACAATCCAAGCTAGGGTCCAGCTAGCCAAGGCTAACAAAAGTGTGAAATCCAGAACCTCATGGATGTGA 735 0.4667 MSFQDIQGGSNPPSRRSQSPSQAVAAGIFQINTAVATFRRLVDAVGTVKDTPEHRQKLHNTRQRILQLVKETSAKLKSLTESDRDANANASKKIEDAKLARDFQTILQEFQKVQQLASERESTYTPATPSLPTSSHSGEESVGIDVESQPFIREQKRQEILLLDNEISFNEAMIEEREHGIREVEEQIGQVNEIFKDLAVLVHDQGVIIDDIQSNIDASAGATIQARVQLAKANKSVKSRTSWM 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr598g00003 244 Gene3D - 9 128 - -
Mupr598g00003 244 FunFam Syntaxin-22 like 15 128 - -
Mupr598g00003 244 SMART tSNARE_6 166 233 IPR000727 -
Mupr598g00003 244 CDD SNARE_Qa 174 232 - -
Mupr598g00003 244 SMART SynN_4 7 122 IPR006011 GO:0016020
Mupr598g00003 244 SUPERFAMILY t-snare proteins 19 222 IPR010989 GO:0016020|GO:0016192
Mupr598g00003 244 MobiDBLite consensus disorder prediction 1 23 - -
Mupr598g00003 244 MobiDBLite consensus disorder prediction 117 142 - -
Mupr598g00003 244 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Mupr598g00003 244 PANTHER SYNTAXIN 21 239 IPR045242 -
Mupr598g00003 244 Gene3D - 172 234 - -
Mupr598g00003 244 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr598g00003 Mupr-Chr598 16771 19960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr598g00003 1 243 SNARE and Associated Proteins AT5G46860 59.036 8.83e-95 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr598g00003 - - gmx:100787141 406.757