Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5989g00001 ATGATTGGAGTTTGGCTTGTGGTGTTGGTGGTTCTCTCCAAAGGGTTACCTTCAACTGGGGTTGTATTGGATAATTCCACAATACCTTCTTTTGTAAATATTGGGGTTCTCTATTCTTTCAATACCAGTGTTGGTAGAATGGTGAAAACTGCAGTGGAAGCCGCGGTTCAAGATGTAAATTCTGATCAATCTATTCTTGCTAAAACTAAGTTGAAGGTCTCACCGCAAGAAGATACCAAATACAGGGGTTTTTTGAGCATTGCTGAGGCCTTGCAACTCATGGCGACGCAAACTGTGGCTATAATCGGCCCCCAGACCTCTACAACAGCTCATGTCATATCTCATATAGCAAACGAGCTCCAAGTTCCTCTGCTATCATTTACGGCCACTGACCCTACCCTTTCTTCACTTCAATTCCCATTCTTTATTAGAACTGCTTTTAGTGACATTTATCAAATGACTGCAATAGCAGACCTTGTTAACTACTTTGGATGGAGAGAGGTTATAGCAGTTTATGGTGATGACGATCATGGGAGGAATGGAATGGGTGCATTAGGGGATAAGCTTGTGGAGAGGCGTTGCAAGATCTCATTTAAGGCACCTATGACTCCTGAGGCAACTAGGGAGGAGATTACTGATGTGCTAGTTCAGGTGGCTCTGGCAGAATCACGGGTTATAGTTCTTCATACAAGTACTGCTTGGGGTCCAAAAGTGTTAAGTGTGGCAAAGTCACTGGGGATGATGGAAAATGGGTATGTCTGGATAACAACTACTTTTCTCTCTACTTGGCTGGATATAAATAGTCCCCTATCTTCGGATGCAACGGATGACATGCAAGGAGTCATTACACTACGAATGTACATACCGGATTCAAAGCTCAAAAGATGGTTTGTTTCTAGGTGGAAAAACTTGACTGCTGGAAACACTAATGGTTCCCTTGGTTTGAGTACGTATGGTATCTTTGCATATGATACTGTTTATGCTCTTGCTCATGCACTTGATGCATTTTTCAAACAAGGGAACCAAATTACATTTTCACATGATCCAAAGTTATCTCAACTACGTGGAGACAACATGCATCTTGATGCTGTGAAAATCTTCAACGAAGGAAATCTGTTGCGTAAAAATATTTATGAGGTTAACATGACTGGTGTATCAGGTCTATTCAAGTATACATCGGATGGAAACCTTGTTAATCCTGCTTATGAAATCATCAATGTGATTGGAACAGGGACTCGTAGGATTGGTTATTGGTCTAATTACACTGGATTATCAATTGATCCTCCAGAAGCACTTTATTCAAAGCCACGTAACCGCTCCAGTGCAAGCCAAAAGATACTCCCTGTGCTTTGGCCGGGAGAAACAACCCAGAAGCCCCGTGGTTGGGTTTTTCCAAACAATGGAAGGATGTTAAAAATTGGAGTGCCAAAAAGGGTTAGTTACCGAGAATTTGTCTCTCAAGTACAAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTGAACTTGTTGCCCTATGCTGTCCCCTATAAATTTGTTTCATATGGTAATGGTTACAGAAATCCTAGTAACACTGAGCTTGTCCGTCTTATCACGGCGGGTGTCTTTGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTAGTGGTAGTAGCATCTGTTAAGAAGACAGATTCCAATGCTTGGGCATTTTTGACACCATTTACGCCAATGATGTGGACTGTCACAGCTATGTTTTTCCTGCTAGTGGGAGCTGTTGTTTGGATTTTAGAGCATAGGCTGAATGATGATTTTAGGGGATCTCCCAAACAACAAATGGTCACAATTTTGTGGTTTAGTTTTTCAACCATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACTCTTGGTCGCTCTGTGCTGCTCATATGGTTATTTGTAGTTCTAATAATTAACTCAAGTTACACGGCTAGCCTGACATCAATCCTCACAGTGCAACAACTTTATTCACCTGTTAAAGGCATTGAAAGTTTAGTAAATAGCAAAGAGCCTATTGGCTACTTGCAAGGTTCGTTTGTTCGAACTTATTTAATTGAGGAAATTGGTATTGATGAATCCAGACTAGTTCCTCTAAAAACACCAGAAGAAACTACCAAAGCACTAGAAAAAGGTCCCCAGAAGGGTGGCATTGCTGCATACATTGACGAGCGTGCTTACATAGAGCTCTTCCTTTCAAGTCGATGTGATTTTAGTATCGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCACGAGACTCACCGCTAGCCGTTGACCTTTCAACTGCCATATTGGAGTTGGCAGAGAATGGAGACTTGCAAAGGATCCATGACAAATGGCTTTTGAGCAGTGCTTGCCTATCACAAGGTGCAAAGCTTGAAGTGGACAGACTCAACCTGAGAAGCTTTTGGGGCCTCTATTTGGTGTGTGGGTTGGCATGTGTGCTTGCTCTCCTCATATACCTTGTTCAGACCATGAGGCAGTACTCCAAACACTGCCCGGAGGAACTGGAGTCTTCAGCTTCCGGCCCTGGCTCAGGATCTTCACGTCTGCGCACATTCCTTTCGTTCGTAGACGAAAAGGAAGAGATAGCTAAGAGCCGCTCCAAGAGAAAGAAAGTGGAGGAGATTTCATACAGAAGCACTAGTGAGATTGGATTGCCCATCACCTCCAACAAAGAATATTCTCAGGCATCATCAAACAGAATTGATTCAGCTAATGAAATCTAA 2820 0.4245 MIGVWLVVLVVLSKGLPSTGVVLDNSTIPSFVNIGVLYSFNTSVGRMVKTAVEAAVQDVNSDQSILAKTKLKVSPQEDTKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFIRTAFSDIYQMTAIADLVNYFGWREVIAVYGDDDHGRNGMGALGDKLVERRCKISFKAPMTPEATREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWITTTFLSTWLDINSPLSSDATDDMQGVITLRMYIPDSKLKRWFVSRWKNLTAGNTNGSLGLSTYGIFAYDTVYALAHALDAFFKQGNQITFSHDPKLSQLRGDNMHLDAVKIFNEGNLLRKNIYEVNMTGVSGLFKYTSDGNLVNPAYEIINVIGTGTRRIGYWSNYTGLSIDPPEALYSKPRNRSSASQKILPVLWPGETTQKPRGWVFPNNGRMLKIGVPKRVSYREFVSQVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFVSYGNGYRNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAMFFLLVGAVVWILEHRLNDDFRGSPKQQMVTILWFSFSTMFFAHRENTVSTLGRSVLLIWLFVVLIINSSYTASLTSILTVQQLYSPVKGIESLVNSKEPIGYLQGSFVRTYLIEEIGIDESRLVPLKTPEETTKALEKGPQKGGIAAYIDERAYIELFLSSRCDFSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLNLRSFWGLYLVCGLACVLALLIYLVQTMRQYSKHCPEELESSASGPGSGSSRLRTFLSFVDEKEEIAKSRSKRKKVEEISYRSTSEIGLPITSNKEYSQASSNRIDSANEI 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5989g00001 939 Gene3D - 754 818 - -
Mupr5989g00001 939 Pfam Ligand-gated ion channel 812 844 IPR001320 GO:0015276|GO:0016020
Mupr5989g00001 939 SUPERFAMILY Periplasmic binding protein-like II 447 813 - -
Mupr5989g00001 939 FunFam Glutamate receptor 708 815 - -
Mupr5989g00001 939 Gene3D - 582 710 - -
Mupr5989g00001 939 FunFam Glutamate receptor 582 712 - -
Mupr5989g00001 939 SUPERFAMILY Periplasmic binding protein-like I 28 463 IPR028082 -
Mupr5989g00001 939 SMART GluR_14 472 813 IPR001320 GO:0015276|GO:0016020
Mupr5989g00001 939 Pfam Bacterial extracellular solute-binding proteins, family 3 528 811 IPR001638 -
Mupr5989g00001 939 Gene3D - 148 424 - -
Mupr5989g00001 939 FunFam Glutamate receptor 466 582 - -
Mupr5989g00001 939 PIRSF IGluLR_plant 1 938 IPR017103 -
Mupr5989g00001 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 322 334 - -
Mupr5989g00001 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Mupr5989g00001 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Mupr5989g00001 939 Pfam Receptor family ligand binding region 48 409 IPR001828 -
Mupr5989g00001 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 890 IPR015683 -
Mupr5989g00001 939 CDD PBP1_GABAb_receptor_plant 33 425 IPR044440 -
Mupr5989g00001 939 Gene3D - 470 581 - -
Mupr5989g00001 939 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr5989g00001 939 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr5989g00001 939 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr5989g00001 939 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr5989g00001 939 FunFam Glutamate receptor 148 299 - -
Mupr5989g00001 939 CDD GluR_Plant 469 811 - -
Mupr5989g00001 939 Gene3D - 50 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5989g00001 Mupr-Chr5989 3226 7521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5989g00001 5 914 Ion Channels AT3G51480 59.276 0.0 1155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5989g00001 K05387 - gmx:100788917 1702.95