Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5988g00001 ATGGCGACGAGATACTGGGTAGTGTCTCTCCCCGTTCAAAATTCCGCATCCACTCTGTGGAACAAATTGCAGGAACAAATCTCCAAACATTCCTTCGACACTCCTCTTTACCGGTTCAACATCCCCAATCTCCGCGTCGGAACCCTAGACTCTCTCCTCTCTCTCAGCGATGATCTCATCAAGTCGAACAGTTTCATGGAGGGAGTGTCGCACAAGATCAGGCGGCAGATTGAGGAGCTGGAGAGAGTGTCCGGCGTGGTGAGCAGTGGTTTGACGGTAGATGGAGTTCCCGTTGATTCGTACTTGACGAGGTTTGTTTGGGATGAAGCTAGGTACCCGACTGTGTCGCCGTTGAAGGAGATTGTGGATGGGATTCATGGTCAGGTGGCAAAGATTGAGGATGATCTCAAGGTGGTTGCAGGTGACAATTGGTTGTTTGTGGTTGCTGGTGCTAAGGGAGGGCCAGCAGAGAGTGTGGCAAATGGCAGTGGTGCCTGGTTGCGTGTTTGGCAGGCTGGATGA 522 0.5211 MATRYWVVSLPVQNSASTLWNKLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLIKSNSFMEGVSHKIRRQIEELERVSGVVSSGLTVDGVPVDSYLTRFVWDEARYPTVSPLKEIVDGIHGQVAKIEDDLKVVAGDNWLFVVAGAKGGPAESVANGSGAWLRVWQAG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5988g00001 173 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 2 138 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mupr5988g00001 173 Gene3D - 41 142 - -
Mupr5988g00001 173 SUPERFAMILY Vacuolar ATP synthase subunit C 1 139 IPR036132 GO:0015078|GO:0033180|GO:1902600
Mupr5988g00001 173 Pfam V-ATPase subunit C 5 138 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5988g00001 1 138 Primary Pumps ATPases(2) AT1G12840 84.058 1.78e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5988g00001 K02148 - gmx:100803728 261.151