Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5987g00003 ATGTTGGATCTGCGCATTGTTATTGGTGAAGAAGTGACCATAACGTTGTCCAACCGTGGCCATGCGACAGATCCAAGACGGATACCAGACATGGGGGAAGAAAATGGCGAAGGAAGATCCTTAGCTGAAACCCCCACATATGCCGTGGCAACTGTGATCACTGTCTTGGTTTCTCTAAGTTTCTTGTTTCAAGGCACGTTAAAAAAATTGGTAAAATGGTTGGACAGAACCAAGAGAAAATCTCTGCTTTCTGCTCTGGAAAAGATCAAAGAAGAATTAATGCTTTTTGGACTTCTGTCATTGCTGATGGGTCATTGGATTATTTTTGTGGCAAAGATTTGCGTTAAGTCATCGGTATTAAGCAGCAGATTTTTTCCGTGTGCAATGGAAAAGAATTCTGGAACTGTGAAACGTGTTGTCTGGTTGAGTTCAGAATATTCAAATAAAACAGTTGTCAAAGGGCAAGTGAGCAATGGCTTGCATAATTTTTGTCCTGAGGGTCATGAATCATTGGCTTCTTATGAAAGTCTTGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGGGATCACGCATATTACCTATAGCTTTGTTGCTGTTGCCCTGTCCATGATCAAGATATATAGCTGGAGAACATGGGAAAACGAAGCGAAGACTATTGCTATACAAAGCGTACAAGATACTTCACAAAGTACATCAAGCATAAGATTGAGGCGGCTTAGTACATTCGTCTTTCAACGTACCTCCCATCCTTGGAGTCATCACAAAATTCTTGTTTGGCTGCTATGTTTCAGCCGCCAATTTTGGAGTTCTATCCACCGAGCTGATTACATGGCATTGCGCTTAGGCTTCATTACCAATCACGAGCTTCCCATAACATATGATTTCCACAACTATATGCTTCGAAGCATGGATGAGGAATTTCGTGACATAGTTGGTGTTAGTGTGATTCTCTGGATATATGCCATCTGCTGTATTTTTCTAAATTTTCACGGAAGCAACTTTTACTTTTGGCTTTCCTTCGTTCCAGCAATTTTGATCCTCATAATTGGTACTAAATTGCATCGCGTGGTGGTAAAGTTGGCTGTTGAAATAATAGATCGTTGCCCATATATGAAACCTCATCAGTTTAACTTAAGAGATGAGCTATTTTGGTTTGGAAAGCCCAGGTTTCTGTTACGGTTAATACAATTGATATCCTTCTTGAATGCATTTGAAATGGCAACGTTCTTGTGGTCCCTGTGGGAAATTAAAGATCCTTCTTGCTTCATGAACAACCGAACGTTTATTGTGATCCGGTTGTCATTCGGGGTCATCTCCCAAGTCTGGTGCAGCTTTATAACGTTCCCTCTCTATGTTATCATCACACAGATGGGCTCAAGGTTCAAGAAGACTGTGATCTCTGAAAATGTGAGAAAATCACTCTCTAAATGGCAGAGAAGAGTGAAGGACAGACAAAGTTCCTCTTATACACACCTCACTGTAACATCATCAACATCATTGAGTTCTTTTATGTATGGAACTGACAAGTCTAATTCCCGTGCCTCAAATAGTGAGGAAGGAAGCTCCTCAGGGACTAAAGATATTTGTCTCTCTTATCTTGATCATGTGTCAAAGACCCAAGGAAATGCACCATTTCCAAGTTATGAAGATGATCATGATCATGATCGTGCACCTCTCGGTCTCAGAACAAAGTTCTTTCACTCTTTTGCTTCTGAATCTCTAACAATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAATGGTGATTACGCTCCTTCTCGATTTCAAGCTCAAGCAGACGCTGTCAATCTCATTTGCGGTGCTAAAACCCAGTCTAATCCGGAAAATACAGTAGGAGTTCTCACAATGGCAGGGAAAGGTGTTCGTGTTTTGGTAACCCCTACCAGTGATCTGGGCAAGATCTTAGCCTGCATGCATGGACTAGAAATAGGTGGTGAGATGAACCTAGCTGCTGGCATTCAGGTGGCACAATTGGCTCTTAAGCATCGGCAAAATAAAAAGCAACAGCAGAGAATTATTGTCTTTGCTGGAAGTCCTGTCAAGCATGAAAAGAAGATGTTGGAGATGATAGGGAGGAAGTTGAAAAAGAATAGTGTTGCACTTGATATTGTTAATTTTGGTGAAGAAGATGAGGGGAAGACAGAGAAGCTGGAAGCACTCCTTGCAGCTGTTAACAATAATGATACCAGCCACATTGTTCATGTTCCATCTGGTCCAAATGCTCTTTCTGATGTACTTATAAGTACACCCATTTTTACTGGTGATGGGGAAGGTGGAAGTGGTTTTGCTGCAGCTGCTGCTGCAGCAGCAGCAGGTGGTGTATCTGGATTTGAGTTTGGTGTGGATCCAAACTTGGATCCAGAATTGGCTCTTGCTTTAAGAGTTTCAATGGAAGAGGAGAGAGCCAGGCAGGAAGCAGCTGCGAAAAAAGCTGCAGAGGATGCTTCCAAACAAGAGAAAGGAGGTGAGCAGCAAGCCAGCTCACAAGATGCAACAATGACTGAGCGTGCCAGTGCAGCAACATCTGAAGCTGAGAATAAGACAAGTGATTTGATGGACGATGAGAATGCCTTACTACAGCAGGCGCTTGCAATGTCAATGGATGATCCTGCCATTAGCCATGATGTAAAAGATACAGATATGTCAGAAGCATCTGCAAGCGATCCTGATTTGGCTCTAGCTCTCCAATTGTCAATAACAGATAGTGAAAAGGATCAAGCAAGCCAGGCGGACATGAGCAAATTGTTGGCTGATCAATCCTTTGTATCTTCTATCCTTGCATCGCTTCCTGGTGTTGACCCAAATGACCCTTCCGTCAAGGATTTGCTGGCCTCCATGCAAAATCAGTCTGAGCCTCAACAGAAGAATGACGACAAGCCATCAAACGAGGAGGAGAAGAAGTAA 2943 0.4264 MLDLRIVIGEEVTITLSNRGHATDPRRIPDMGEENGEGRSLAETPTYAVATVITVLVSLSFLFQGTLKKLVKWLDRTKRKSLLSALEKIKEELMLFGLLSLLMGHWIIFVAKICVKSSVLSSRFFPCAMEKNSGTVKRVVWLSSEYSNKTVVKGQVSNGLHNFCPEGHESLASYESLEQLHRFVFVLGITHITYSFVAVALSMIKIYSWRTWENEAKTIAIQSVQDTSQSTSSIRLRRLSTFVFQRTSHPWSHHKILVWLLCFSRQFWSSIHRADYMALRLGFITNHELPITYDFHNYMLRSMDEEFRDIVGVSVILWIYAICCIFLNFHGSNFYFWLSFVPAILILIIGTKLHRVVVKLAVEIIDRCPYMKPHQFNLRDELFWFGKPRFLLRLIQLISFLNAFEMATFLWSLWEIKDPSCFMNNRTFIVIRLSFGVISQVWCSFITFPLYVIITQMGSRFKKTVISENVRKSLSKWQRRVKDRQSSSYTHLTVTSSTSLSSFMYGTDKSNSRASNSEEGSSSGTKDICLSYLDHVSKTQGNAPFPSYEDDHDHDRAPLGLRTKFFHSFASESLTMVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKHEKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDTSHIVHVPSGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDASKQEKGGEQQASSQDATMTERASAATSEAENKTSDLMDDENALLQQALAMSMDDPAISHDVKDTDMSEASASDPDLALALQLSITDSEKDQASQADMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQNQSEPQQKNDDKPSNEEEKK 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5987g00003 980 MobiDBLite consensus disorder prediction 817 833 - -
Mupr5987g00003 980 FunFam 26S proteasome non-ATPase regulatory subunit 4 578 761 - -
Mupr5987g00003 980 MobiDBLite consensus disorder prediction 954 968 - -
Mupr5987g00003 980 FunFam 26S proteasome non-ATPase regulatory subunit 4 homolog 795 881 - -
Mupr5987g00003 980 CDD PSMD4_RAZUL 920 964 - -
Mupr5987g00003 980 MobiDBLite consensus disorder prediction 940 980 - -
Mupr5987g00003 980 SUPERFAMILY vWA-like 579 749 IPR036465 -
Mupr5987g00003 980 Gene3D - 795 881 - -
Mupr5987g00003 980 SMART uim 797 816 IPR003903 -
Mupr5987g00003 980 SMART uim 899 918 IPR003903 -
Mupr5987g00003 980 SMART uim 867 886 IPR003903 -
Mupr5987g00003 980 CDD VWA_26S_proteasome_subunit 576 763 - -
Mupr5987g00003 980 Coils Coil 807 827 - -
Mupr5987g00003 980 ProSiteProfiles VWFA domain profile. 580 764 IPR002035 -
Mupr5987g00003 980 MobiDBLite consensus disorder prediction 817 864 - -
Mupr5987g00003 980 Pfam Ubiquitin interaction motif 901 911 IPR003903 -
Mupr5987g00003 980 Pfam Ubiquitin interaction motif 867 882 IPR003903 -
Mupr5987g00003 980 Pfam Ubiquitin interaction motif 799 812 IPR003903 -
Mupr5987g00003 980 MobiDBLite consensus disorder prediction 23 37 - -
Mupr5987g00003 980 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 797 816 IPR003903 -
Mupr5987g00003 980 Gene3D von Willebrand factor, type A domain 578 761 IPR036465 -
Mupr5987g00003 980 Pfam Mlo family 39 514 IPR004326 GO:0006952|GO:0016020
Mupr5987g00003 980 PANTHER MLO-LIKE PROTEIN 1 36 543 IPR004326 GO:0006952|GO:0016020
Mupr5987g00003 980 MobiDBLite consensus disorder prediction 20 39 - -
Mupr5987g00003 980 SMART VWA_4 577 750 IPR002035 -
Mupr5987g00003 980 MobiDBLite consensus disorder prediction 834 859 - -
Mupr5987g00003 980 Pfam von Willebrand factor type A domain 581 690 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5987g00003 Mupr-Chr5987 18676 32491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5987g00003 37 498 MLO family AT1G11000 51.502 1.22e-152 462