Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr5970g00001 | ATGTTACATTGTCTCAACAGTTCGGGGAATCTAGGAGGCACCTGTTCGGACATGACACTCATGGAAAGGCCCGTCAAGTGGCAACTAGAGAACCACCATCATCAACCTGACCTTAACGTTTTCTCTTCTTCTTCTTCTCACAATCTCCCTCAGACTCTCATGACGTGTGCTGATTCCGCCCTCGGGGAGGTCTTGGCCCATTCCCTCAAACCCGACCCTGCTCTCTGGCCCCAATTGGACCCTCCCTTCGGATCTTCTTCTGCTTTGCCCACTAAGAAGAGGAAATCTCCCAACTCCAAGGTTCTTGCCGATACTGATAACAGAGACAAGAGAGTCAAAGTTACTGCTGAGGAAGGGGAATCCAAAGTCACCGACCAACCCACCAACAAGAATTCTAAATCCAACAGGGAAACCTCTGCGGATACTTCCAAAGGCTCCGAGGTTCAAAATCAAAAGCCTGAGTACATTCATGTCCGAGCCCGTCGTGGTCAAGCCACCGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGAGAGAAGATTAGCGAGAGAATGAAGTATTTGCAGGATTTAGTACCCGGTTGCAACAAAATTGCCGGAAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAACGACAAGTTGAGTTCTTGTCGATGAAATTAGCGGCTGTAAACCCAAGACTTGACTTCAACATCGAGGAACTGTTTGCCAAAGAGGTGTTTCCTTCTTGTGCTCAAGGTTTTCCGAACATGGGGATGGCATCGGATATGAATAACAACCACGCGTATCTTCAGTTCAATTCAGCGCAGCAACTTGGTGGGTTAATAAATAACATGGGAATAAGCCCTCCCAATATGGGACTTCGAAGGAACATTAGTACCAGCCCTGTACCTTTGCACGAAACGTTTCTTGACTCGTCCTGTTTCACTCAAATTCTACCCTCCTCAAATTGGGAAGGTGATTTCCAAAGCCTTTACAATGTGGCTTTTGATCAAGGGCGAACACCATCCTTTCCTTCTCAACCATTTACAGGTCTAGTTGAAGCTAGCAATCTAAAGATGGAGATGTAA | 1083 | 0.4598 | MLHCLNSSGNLGGTCSDMTLMERPVKWQLENHHHQPDLNVFSSSSSHNLPQTLMTCADSALGEVLAHSLKPDPALWPQLDPPFGSSSALPTKKRKSPNSKVLADTDNRDKRVKVTAEEGESKVTDQPTNKNSKSNRETSADTSKGSEVQNQKPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIEELFAKEVFPSCAQGFPNMGMASDMNNNHAYLQFNSAQQLGGLINNMGISPPNMGLRRNISTSPVPLHETFLDSSCFTQILPSSNWEGDFQSLYNVAFDQGRTPSFPSQPFTGLVEASNLKMEM | 360 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr5970g00001 | 360 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 162 | 233 | IPR036638 | GO:0046983 | |
Mupr5970g00001 | 360 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 77 | 273 | IPR024097 | GO:0006355 | |
Mupr5970g00001 | 360 | Pfam | Helix-loop-helix DNA-binding domain | 168 | 215 | IPR011598 | GO:0046983 | |
Mupr5970g00001 | 360 | FunFam | Basic helix-loop-helix transcription factor | 161 | 233 | - | - | |
Mupr5970g00001 | 360 | CDD | bHLH_AtBPE_like | 154 | 239 | - | - | |
Mupr5970g00001 | 360 | MobiDBLite | consensus disorder prediction | 76 | 172 | - | - | |
Mupr5970g00001 | 360 | MobiDBLite | consensus disorder prediction | 125 | 150 | - | - | |
Mupr5970g00001 | 360 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 164 | 214 | IPR011598 | GO:0046983 | |
Mupr5970g00001 | 360 | SMART | finulus | 170 | 220 | IPR011598 | GO:0046983 | |
Mupr5970g00001 | 360 | MobiDBLite | consensus disorder prediction | 154 | 172 | - | - | |
Mupr5970g00001 | 360 | Gene3D | - | 161 | 235 | IPR036638 | GO:0046983 | |
Mupr5970g00001 | 360 | MobiDBLite | consensus disorder prediction | 97 | 124 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr5970g00001 | Mupr-Chr5970 | 7872 | 9958 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr5970g00001 | 95 | 330 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G34530 | 47.510 | 6.15e-57 | 187 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Mupr5970g00001 | HLH | 3.1e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr5970g00001 | - | - | gmx:100794256 | 541.962 |