Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5970g00001 ATGTTACATTGTCTCAACAGTTCGGGGAATCTAGGAGGCACCTGTTCGGACATGACACTCATGGAAAGGCCCGTCAAGTGGCAACTAGAGAACCACCATCATCAACCTGACCTTAACGTTTTCTCTTCTTCTTCTTCTCACAATCTCCCTCAGACTCTCATGACGTGTGCTGATTCCGCCCTCGGGGAGGTCTTGGCCCATTCCCTCAAACCCGACCCTGCTCTCTGGCCCCAATTGGACCCTCCCTTCGGATCTTCTTCTGCTTTGCCCACTAAGAAGAGGAAATCTCCCAACTCCAAGGTTCTTGCCGATACTGATAACAGAGACAAGAGAGTCAAAGTTACTGCTGAGGAAGGGGAATCCAAAGTCACCGACCAACCCACCAACAAGAATTCTAAATCCAACAGGGAAACCTCTGCGGATACTTCCAAAGGCTCCGAGGTTCAAAATCAAAAGCCTGAGTACATTCATGTCCGAGCCCGTCGTGGTCAAGCCACCGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGAGAGAAGATTAGCGAGAGAATGAAGTATTTGCAGGATTTAGTACCCGGTTGCAACAAAATTGCCGGAAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAACGACAAGTTGAGTTCTTGTCGATGAAATTAGCGGCTGTAAACCCAAGACTTGACTTCAACATCGAGGAACTGTTTGCCAAAGAGGTGTTTCCTTCTTGTGCTCAAGGTTTTCCGAACATGGGGATGGCATCGGATATGAATAACAACCACGCGTATCTTCAGTTCAATTCAGCGCAGCAACTTGGTGGGTTAATAAATAACATGGGAATAAGCCCTCCCAATATGGGACTTCGAAGGAACATTAGTACCAGCCCTGTACCTTTGCACGAAACGTTTCTTGACTCGTCCTGTTTCACTCAAATTCTACCCTCCTCAAATTGGGAAGGTGATTTCCAAAGCCTTTACAATGTGGCTTTTGATCAAGGGCGAACACCATCCTTTCCTTCTCAACCATTTACAGGTCTAGTTGAAGCTAGCAATCTAAAGATGGAGATGTAA 1083 0.4598 MLHCLNSSGNLGGTCSDMTLMERPVKWQLENHHHQPDLNVFSSSSSHNLPQTLMTCADSALGEVLAHSLKPDPALWPQLDPPFGSSSALPTKKRKSPNSKVLADTDNRDKRVKVTAEEGESKVTDQPTNKNSKSNRETSADTSKGSEVQNQKPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIEELFAKEVFPSCAQGFPNMGMASDMNNNHAYLQFNSAQQLGGLINNMGISPPNMGLRRNISTSPVPLHETFLDSSCFTQILPSSNWEGDFQSLYNVAFDQGRTPSFPSQPFTGLVEASNLKMEM 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5970g00001 360 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 233 IPR036638 GO:0046983
Mupr5970g00001 360 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 77 273 IPR024097 GO:0006355
Mupr5970g00001 360 Pfam Helix-loop-helix DNA-binding domain 168 215 IPR011598 GO:0046983
Mupr5970g00001 360 FunFam Basic helix-loop-helix transcription factor 161 233 - -
Mupr5970g00001 360 CDD bHLH_AtBPE_like 154 239 - -
Mupr5970g00001 360 MobiDBLite consensus disorder prediction 76 172 - -
Mupr5970g00001 360 MobiDBLite consensus disorder prediction 125 150 - -
Mupr5970g00001 360 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 214 IPR011598 GO:0046983
Mupr5970g00001 360 SMART finulus 170 220 IPR011598 GO:0046983
Mupr5970g00001 360 MobiDBLite consensus disorder prediction 154 172 - -
Mupr5970g00001 360 Gene3D - 161 235 IPR036638 GO:0046983
Mupr5970g00001 360 MobiDBLite consensus disorder prediction 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5970g00001 Mupr-Chr5970 7872 9958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5970g00001 95 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 47.510 6.15e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr5970g00001 HLH 3.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5970g00001 - - gmx:100794256 541.962