Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5969g00001 ATGGATTGTAGAATAAAGAGCGCAGAAACTCACAGGAATAAGTGTGCAGCATGCTTCCGACAGTTCAACAAACTGGAGCACCTTGTGGAGCACATGAGGATCTCATACCATTCGGTTCATGAACCAACCTGTGGCATTTGCAGGAAACACTGCAGGTCATTTGAGTCTCTAAGGGAACATCTTATAGGTCCATTGCCAAAACAGGAATGCAGAGATATATTTGCCTACAGAGGGTGCAAGTTTTGCTTGAAAGTCCTTGATAGCCCTAACTCTCGCAGGATCCACCAAGAAAATTGCCAACACTCTGGAACAAATGATGGAATAATTGGTCGCTTTTCAAACTTGGGACTTCATGATAATTTGGCTATTGGTGGTGGAGCAAGAGGACCACAACAAGTAGTTGCACTAGCATGTAAAATGGTTGGAGGCGGCAGCGATGGCTCACTGGATCTCTGTGCAAGAGTGTGCTTAACAGATGAGCATGAGAATATAATATTCCACTCTTATGTGAAGCCTCCAATTCCTGTCACAAACTATAGGTATGAAACAACGGGCATTAAACCAGAATACCTGAGGGATGCAATGCCAATGAAACAAGTTCAGAAGAGGATTCAAGACTTTCTTTGCAATGGTGAACCTATGTGGACAATTCGGGCAAGAGGTGGAAGAGCCAGGATTCTTGTGGGTCATGGTTTGGATCATGACCTTGAATGTTTGCAAATAGAATATCGAGTGGAAAAAATAAGGTAA 750 0.432 MDCRIKSAETHRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICRKHCRSFESLREHLIGPLPKQECRDIFAYRGCKFCLKVLDSPNSRRIHQENCQHSGTNDGIIGRFSNLGLHDNLAIGGGARGPQQVVALACKMVGGGSDGSLDLCARVCLTDEHENIIFHSYVKPPIPVTNYRYETTGIKPEYLRDAMPMKQVQKRIQDFLCNGEPMWTIRARGGRARILVGHGLDHDLECLQIEYRVEKIR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5969g00001 249 Gene3D - 129 249 IPR036397 GO:0003676
Mupr5969g00001 249 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Mupr5969g00001 249 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 17 244 IPR047021 GO:0004527
Mupr5969g00001 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Mupr5969g00001 249 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Mupr5969g00001 249 SUPERFAMILY Ribonuclease H-like 146 244 IPR012337 -
Mupr5969g00001 249 Pfam Exonuclease 149 243 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5969g00001 Mupr-Chr5969 9024 10342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5969g00001 1 249 C2H2 Transcription Factor Family AT3G27970 71.713 3.83e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5969g00001 - - gmx:100813973 487.648