Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5965g00001 ATGGCTCCAAGGGACAGAGCCACCGCACTCGCCGGGCCCAGCCCAACAGCACCAGCCCACAACGCCAAAGAGATCCGCTACAGAGGCGTCAGGAAGCGCCCCTGGGGCCGTTACGCCGCCGAGATCCGCGACCCTGGCAAGAAAACCCGCGTCTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCGCGTGCCTACGACGCCGCCGCCCGTGAGTTCCGTGGCGCTAAGGCCAAGACTAATTTTCCCACGCCCTCGGAGCTCATCATAAACACCAACACGCGTAGTCCTAGCCAGAGCAGCACCCTCGACACCTCTTCTCCGCCGCCGCTCGACCTCACCCTCAGCCCACTCTCCGCCGCTGCCGCCGGCGTCGGTGCGCTACCTTTCCCGGTCGCGCGCCCTGTCTTGTTCTTCGACGCCTTTGCGCGTGCCGACTCCATGATCGCCGTCGCCCGCCGCGACACCTGTGGCTTTGAATGTCCGGTGGCGGATTTCCGCCAGAGCGATTCCGATTCGTACGAGCGTCGCGGCCTCTTGGATCTCGACCTCAACGTGCCTCCGCTGCCGGAGACATTTGGCTACGCAGGCGATACTATTTAA 603 0.6501 MAPRDRATALAGPSPTAPAHNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPTPSELIINTNTRSPSQSSTLDTSSPPPLDLTLSPLSAAAAGVGALPFPVARPVLFFDAFARADSMIAVARRDTCGFECPVADFRQSDSDSYERRGLLDLDLNVPPLPETFGYAGDTI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5965g00001 200 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 121 - -
Mupr5965g00001 200 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Mupr5965g00001 200 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Mupr5965g00001 200 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Mupr5965g00001 200 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Mupr5965g00001 200 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Mupr5965g00001 200 FunFam Ethylene-responsive transcription factor 2 26 84 - -
Mupr5965g00001 200 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Mupr5965g00001 200 MobiDBLite consensus disorder prediction 84 110 - -
Mupr5965g00001 200 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Mupr5965g00001 200 CDD AP2 26 83 IPR001471 GO:0003700|GO:0006355
Mupr5965g00001 200 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5965g00001 Mupr-Chr5965 7720 8981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5965g00001 13 140 AP2-EREBP Transcription Factor Family AT3G15210 62.585 2.11e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5965g00001 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5965g00001 K09286 - gmx:100500601 247.284