Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5960g00004 ATGAAAAAATTGTATCTAAATAGGCCGTGCAGGAAGAGGAAATCACGCAAGAGACGCAATGGTGGAAGTGATTCTGTGGAAGACACTTTTGAAAAGTGGAAGGAGTATAACAGGCAGCAACAACTTGGCATTAGAGAAAATGGGATGGAAGTGATTCACAAAGCTCCTGCAAAAGGCTCAAGAAAATGGTGCATGAGAAGTAAAGGAGGGCCTCAGAACTCTGATTGCAAGTTCAGAGGTGTGAGGCAGAGGATTTGGGGTAAATGGGTTGCTGAGATTCGCGAACCTATGTATGGCCCTTGTGCTCGTTTGAATTTCCCTGAGTCCTCTATGGAGCCATTAGACTCTAATGAATCTGAATGTGATAAGAAATTACCAAGTGCTTCTCCAGACACCTTGAATGGTGGTGATGTTGCACAAGCTGTGGAATTGGAGGGGAACCTTCATCAGTCTCATGAAGAGAAACCAAGGTTTTCTAAGGTTGGTGTCTTTGAGGAAACAAAAGAGAAACCGGTTTTTTGTTGTATGGCTGATGACTCAATAGAGGAGTTGAAAGATATGACAATTGGCTTTGAAGAATGTAAGGCTAAAGCTTTTAAGAATGTTAAGTCTGAAGCAGCTGGAGAAAGTGAAGGAGTTGAGAGAGAATTAGAGGAGGTCATGAAAATCTCTGGCATAAGTGAAGAGAGTAATCGCTTGCAGATGAATACAAGGGATAGCAATTCAAGATTAAATTATGAGCAATTTAATAACACACAAACTGAGGCTTCTATTGCAAATAAACATACTGAGGAAGTAATTTCTGAAATCCCGGGACTATGTCACAGCAAGTGCTTGCAGATTAGTCACTCTCAGTTACCAAATGAGCAATATAGAAGTGAACATTTTGATGAGATGAAAACTGAGCTTAAGGCTTTGGAGTGCAAGCTGAGAGCAAATTCTATTCATTACAAGAATCAGGCTCCCATAGTTGGGGATTCCAATCACCCTTCTATGCAGGGAATTCATCTGTTTGGAGGTGGCACTGTTGGACCTATTGAAAATATGTCCCAAGTTGAGGCTTTGAACAACATCAATGCAAACAGAAATTCACTACCTTCTGGCCATAGTAGGAAGTTGAGTGATGTTTCTCAACATTTACACAAAATTGGTGGTTACTTTCCTGAGCAGTTTGCAGACTTGGAAGTGGGTTATGATTATAGTTTCTTACGTCCTGATTATGATTTTGGCTTAGTGGAAGAGCAG 1245 0.408 MKKLYLNRPCRKRKSRKRRNGGSDSVEDTFEKWKEYNRQQQLGIRENGMEVIHKAPAKGSRKWCMRSKGGPQNSDCKFRGVRQRIWGKWVAEIREPMYGPCARLNFPESSMEPLDSNESECDKKLPSASPDTLNGGDVAQAVELEGNLHQSHEEKPRFSKVGVFEETKEKPVFCCMADDSIEELKDMTIGFEECKAKAFKNVKSEAAGESEGVERELEEVMKISGISEESNRLQMNTRDSNSRLNYEQFNNTQTEASIANKHTEEVISEIPGLCHSKCLQISHSQLPNEQYRSEHFDEMKTELKALECKLRANSIHYKNQAPIVGDSNHPSMQGIHLFGGGTVGPIENMSQVEALNNINANRNSLPSGHSRKLSDVSQHLHKIGGYFPEQFADLEVGYDYSFLRPDYDFGLVEEQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5960g00004 415 ProSiteProfiles AP2/ERF domain profile. 77 104 IPR001471 GO:0003700|GO:0006355
Mupr5960g00004 415 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 97 302 - -
Mupr5960g00004 415 MobiDBLite consensus disorder prediction 109 133 - -
Mupr5960g00004 415 MobiDBLite consensus disorder prediction 1 29 - -
Mupr5960g00004 415 SMART rav1_2 77 113 IPR001471 GO:0003700|GO:0006355
Mupr5960g00004 415 SUPERFAMILY DNA-binding domain 77 108 IPR016177 GO:0003677
Mupr5960g00004 415 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5960g00004 Mupr-Chr5960 10603 12113 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5960g00004 16 112 AP2-EREBP Transcription Factor Family AT2G40350 50.505 5.66e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5960g00004 - - gmx:100500303 501.516