Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5955g00001 GATATATCTACAATACTCAGTACTGAAGATCATAGTGAATTAATGCAAAGTGTAGCCAATAAAAGCTCCTCTCAGTTTTTTCATCTCCCACCCGTTCTCAACAATTCTTCAGAGAAAAGCAGAGATGAACATTCGCAGAATGGGGAAATTGATGCAGTCAGAATTTTCTTGGATAATATTGGAAAATCTAGTAAGGAAATCACAGAATCTTTTGCTAGCATTTTGTTGACAGTTCTTTCTTTGTTTTTCATATCCATTGGCATAGGTGAAGATGCTGCAGTGATTTTGTACACTAGTGGGACTACAGGTAAACCTAAGGGAGTTGTTCATACACATAAAAGCATCATTTCCCAGGTCCAAACTTTGACAAAAGCGTGGGAGTACACATCTGCTGACCAATTTCTGCATTGTCTGCCACTACATCATATCCATGAAAGCTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTGAGGGGGGTTTGGCAAAGATGGCGTGAGTCATATCCAACTGATGGTTCTAAGGCTGACGATGCTATAACTATGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAATATGCTTCGGCATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCGCTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCAAATCCATTGAAAGGTGAGCGCAAGCCGGGAACCGTTGGCAAACCATTTCCTGGTATACAGGTCAAGATCATTGCAGATGAAGATGGTGGGAATGGAAATACTGGAACGGGTGAGCTATGTGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCCGAGGTAACAAAGGAATCATTTACTGATGATGGATTCTTTAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTATATCATTTTAGGACGTACTAGTGCTGATATAATCAAGGCTGGTGGCTATAAACTGTCTGCATTAGAAATTGAATCAGTTATACATCCAGCTATCTCAGAATGTTGCGTTTTAGGCTTACCAGACAAAGACTACGGAGAGATTGTTGGCGCAATCATTGTGCCACAGGCTGATGTTAAACGAAAGCGAGATCAAGAGTCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCATCTAAACTAATCGTGTGGGACTCAATCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTTCTGGTTTGA 1356 0.4115 DISTILSTEDHSELMQSVANKSSSQFFHLPPVLNNSSEKSRDEHSQNGEIDAVRIFLDNIGKSSKEITESFASILLTVLSLFFISIGIGEDAAVILYTSGTTGKPKGVVHTHKSIISQVQTLTKAWEYTSADQFLHCLPLHHIHESSTVEFLPKFSVRGVWQRWRESYPTDGSKADDAITMFTGVPTIYARLIQGYHAMDPELQYASASAAKNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEDGGNGNTGTGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDEDGYYIILGRTSADIIKAGGYKLSALEIESVIHPAISECCVLGLPDKDYGEIVGAIIVPQADVKRKRDQESKPVLSLEELSTWAKDKIAPYKIPSKLIVWDSIPRNAMGKVNKKELKKLLV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5955g00001 451 ProSitePatterns Putative AMP-binding domain signature. 95 106 IPR020845 -
Mupr5955g00001 451 Gene3D - 66 340 IPR042099 -
Mupr5955g00001 451 PRINTS AMP-binding signature 102 110 IPR020459 -
Mupr5955g00001 451 PRINTS AMP-binding signature 90 101 IPR020459 -
Mupr5955g00001 451 CDD MCS 91 448 - -
Mupr5955g00001 451 Pfam AMP-binding enzyme C-terminal domain 357 440 IPR025110 -
Mupr5955g00001 451 SUPERFAMILY Acetyl-CoA synthetase-like 80 449 - -
Mupr5955g00001 451 PANTHER ACYL-COA SYNTHETASE 89 447 - -
Mupr5955g00001 451 Pfam AMP-binding enzyme 89 347 IPR000873 -
Mupr5955g00001 451 Gene3D - 343 451 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5955g00001 Mupr-Chr5955 239 4874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5955g00001 90 450 Monolignol Biosynthesis Gene Families AT4G19010 29.787 3.41e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5955g00001 K18660 - gmx:100813324 736.873