Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5954g00002 ATGTCTCTATTTGCCAAAAGTGTTTTCTTACTTTGGCTGCTTACGCTACCATCGTCCAGCAATGCTATGGGACAAAGAACATATGTAAAAGTAAAAAATTCTTTAGAAAATGGAGCAGATCTGTTCCTTCACTGTAAATCTGCTGACGATGATCTTGGAGTAAAAGTTCTCCATCGCAATGCTTCTTATGGGTGGGGTTTTGTAGTTAACATTTTTGGAACAACGTTGTTCCATTGTTCCTTTCGATGGAACAATGTCAAGCACAGTTTTGCTATATACACAGCAAAAAGGGATTACTTCAGATGTGACACGTGTTCTTGGTCATGA 327 0.3853 MSLFAKSVFLLWLLTLPSSSNAMGQRTYVKVKNSLENGADLFLHCKSADDDLGVKVLHRNASYGWGFVVNIFGTTLFHCSFRWNNVKHSFAIYTAKRDYFRCDTCSWS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5954g00002 108 PANTHER - 26 107 IPR010264 -
Mupr5954g00002 108 Pfam Plant self-incompatibility protein S1 29 108 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5954g00002 Mupr-Chr5954 18523 18980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5954g00002 25 107 Carbohydrate Esterase AT3G16970 39.080 4.69e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5954g00002 - - pvu:PHAVU_011G171500g 127.102