Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5950g00005 ATGGAGGAGGTTGAAGAAGCTAATAGGGCAGCTGTTGAGAGCTGTCATAGAGTTCTGAGTATGATGTCACAACCAAAGGATGAAGTTCAGTATAGGAATTTAATGGTGGAAACTGGAGAGGCTGTAGTGAGGTTCAAGAAAGTTGTTTCCATGCTAAGTAGTGGTTTGGGTCATGCAAGAGTAAGGAAGCTCAAAAAACTTCAAATGCCTTTTTCTCAAACTATCCTCTTGGACAACCCCAATTGCAAAACCAACCATCATTCAAAAAATCTGCAATTTCCTCAAACAAGTTTTGCTGACAATTCACTTCAGGAAATGGGTCCAACCTTGAGAAATTCACTCTACATGGGAAACCCTTCTTTGGAATTGAGCTCCAATGAGAGAAGTCCTCTTCAGCTCACCCAACAAACTTCATCCACACACTACCACATCCTCCAGCATCAGCAACAACAAAGGTTGCTGTTGCAGCAGCAACAAATGAAACTTCAAGCGGAAATGATGTTTCGAAGGAACAACAGTGTCATCAATTTGAACTTTGATAGCTCTAGCTGCACGCCATCAATGTCGTCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGAAAGCGTGGCTAACTTGGATGGAAGTGCCTTCCATTTACTAGGAGCTGCACACTCCTCCGATCAGAATTCACAGCAGCACAAGAGAAAGTGTTCTGCCAAAGGTGATGATGGTAGTGTGAAGTGTGGGAGCAGTGCAAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATTAAGGTGCCTGCTACCAGCAACAAACTTGCAGATATCCCTCCCGATGATTATTCATGGAGGAAGTATGGGCAGAAACCAATCAAGGGATCACCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTTCCATGCTACTTGTTACCTATGAAGGAGACCACAACCACCTCAAGTTACCAACAACACAATCTACAAATGCGTGA 1038 0.4403 MEEVEEANRAAVESCHRVLSMMSQPKDEVQYRNLMVETGEAVVRFKKVVSMLSSGLGHARVRKLKKLQMPFSQTILLDNPNCKTNHHSKNLQFPQTSFADNSLQEMGPTLRNSLYMGNPSLELSSNERSPLQLTQQTSSTHYHILQHQQQQRLLLQQQQMKLQAEMMFRRNNSVINLNFDSSSCTPSMSSTRSFISSLSIDESVANLDGSAFHLLGAAHSSDQNSQQHKRKCSAKGDDGSVKCGSSARCHCSKKRKHRVKRSIKVPATSNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLLVTYEGDHNHLKLPTTQSTNA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5950g00005 345 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5950g00005 345 Coils Coil 145 165 - -
Mupr5950g00005 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 343 IPR044810 GO:0003700
Mupr5950g00005 345 MobiDBLite consensus disorder prediction 218 237 - -
Mupr5950g00005 345 SMART WRKY_cls 276 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5950g00005 345 Pfam Plant zinc cluster domain 229 274 IPR018872 -
Mupr5950g00005 345 ProSiteProfiles WRKY domain profile. 271 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5950g00005 345 Gene3D WRKY domain 260 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr5950g00005 345 FunFam WRKY transcription factor 65 260 337 - -
Mupr5950g00005 345 SUPERFAMILY WRKY DNA-binding domain 274 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5950g00005 Mupr-Chr5950 28012 29862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5950g00005 1 343 WRKY Transcription Factor Family AT2G30590 54.948 6.24e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr5950g00005 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5950g00005 - - gmx:100170681 553.518