Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5950g00004 ATGCCTGCCCACGCGCTTCCCATTCCGAGACACTCTCCGTCCTCCAAGCCCAAGCCCAAGCCCAAGGATGCCCATTTCAGGGGCGTCCGCAAGCGTCCCTGGGGCCGTTTCGCCGCCGAGATCCGCGATCCCTGGAAAAAGACCCGAAAGTGGCTTGGCACCTTCGACACCGCCGAAGAGGCCGCCAGGGCCTACGACACCGCCGCCAGAACCCTCCGTGGGCCCAAGGCCAAGACCAACTTCTCATACGTCGTTGCTCCCGCTCTCCATCTCCCTCCCGCGGTGCTCGCTTCTCCCGAAGCCCAGGCCCAGGCCCAAGACCAACTTGTCAGCCATGTCCAGTTCTGGAGCCCTCCGTTGCACTTTGCGACCGATGTAGCTTCCGGCACGCCAATAAGGTCAGAGTATAAGGGTTACAAGTTGGAGAACATTGCAGGTTTTGTAGTGAACAAGGAGGAGGAGAAAACGCTGAACGAGAAGAAGAAGCCGTTCTTGTTGGACCTTAACCTGCCGGCGCCGCTCTGCTGA 528 0.6023 MPAHALPIPRHSPSSKPKPKPKDAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDTAARTLRGPKAKTNFSYVVAPALHLPPAVLASPEAQAQAQDQLVSHVQFWSPPLHFATDVASGTPIRSEYKGYKLENIAGFVVNKEEEKTLNEKKKPFLLDLNLPAPLC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5950g00004 175 Gene3D AP2/ERF domain 24 84 IPR036955 GO:0003700|GO:0006355
Mupr5950g00004 175 FunFam Ethylene-responsive transcription factor 2 24 83 - -
Mupr5950g00004 175 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Mupr5950g00004 175 MobiDBLite consensus disorder prediction 1 29 - -
Mupr5950g00004 175 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Mupr5950g00004 175 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 105 - -
Mupr5950g00004 175 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Mupr5950g00004 175 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Mupr5950g00004 175 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Mupr5950g00004 175 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Mupr5950g00004 175 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5950g00004 Mupr-Chr5950 17023 17550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5950g00004 22 81 AP2-EREBP Transcription Factor Family AT5G44210 86.667 8.73e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr5950g00004 AP2 2.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5950g00004 K09286 - gmx:100816599 241.506