Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5943g00001 ATGGGTTGCAGTGAACAAGGAAAACCCCATGTCTTGCTTGTTCTAACGTACTTGTGGTTGTGGTGGTGGTGGACTACTTGTATCCACGTCGAAGCCGGCAATGATAGTCTGAAGCCAGGTGATACGCTGAATGCCACAGCTGAGGCACCCCTATGTTCAGAAAACGGTAAATTTTGCATGAGTTTTGGCCTAAGCACTGATGGTGAGGATGCAGTTTACTTGAATATATATGCCCAAAAAAAAGATGAGTGGGTAGTGTGGGTTGCTAATAGAAACCAACCTGTTGACTCAAATTCTGCAGTTCTATCATTGAACCATTCTGGGGTACTTAAAATTGAATCCCAAGATGGGGAACCAATAATCCTTTTCTCAACACCTCAACCAATCAACAACATTGTTGCCACCTTGTTAGACACAGGCAATTTTGTGCTCCAACGACTTCACCCTAATGGGTCTACAATGGGTGTGTTGTGGGAAAGTTTTGATTTTCCCAGTGACACTTTGCTACCTGAGATGAAGTTAGGTGTGAATCACAAAACTGGCCATAATTGGACATTGGTTTCATGGTTGAGTAAATTTGTCCCAACTCCCGGTCCATTCAGGCTTGAATGGGAGGCAAAGGAAAAACAGTTGATCATAAAGCGAAGGGAACAGGTTTACTGGACAAGTGGAAAGAGACTGGAGCACATTTTAGGGCAGGGTCAGTACGAGATTGTCTCAAACGAAAATGAAGAGTTCTTCAGATTGAAAAGTTCAACAGAAGAGCTCACAAAATGGACACTGTTGTCAACTGGGCAGCTGATAAATCGGAACGGAGATGATGTTGCAAGGGCTGATAAGTGTTATGGGTACAACACAGATGAAGGGTGCCAGAAATGGGAGGAGATACCCTCCTGTAGGCATCGTGGTGATCAATTTGAACTCAAGCAGGGTTACCCCAATTTGAACATGAAAAGAGATGAACAAAATTCGAGTTATGGCATAAGTGATTGCCAGGCTATTTGCTGGAGAAATTGCACCTGCGTTGGATTTGCTCCTTATCATGATAATGAAACTGGCTGCATCTTCTTTCTATGGGATTCAATGAAGGGTACCAATTTTGCAAGCGAGGGTGATAAATTTTATATGCTAGTAAGGAGCAACCATCAAAATCGTATAAAAATGTGGATATGGGCAATTGTTGCAGTAGGAGCAACTATACTCATAATATGCCTTTGCATTCTGTGCAGGGTCTTAAAGAGAAAATATGTGCTTAAAGATCTAGAGAATAAAAGAAATGGAATGGAGACTGAGAAGCAAGATCTTGCAGCTTCCAGTAGACCCTTTAGCGCCGACAAACTAGAAGTTTATTTAAAGGAGGAACATGACTTGAAAGTATTTAGTTATGCATCAATAATAGAGGGAACAAATGACTTTTCTTCTAAAAACATGTTAGGAAAGGGAGGCTTTGGAGAAGTTTATAAGGGTATTCTATCTACCAGACAAGAAGTTGCTGTGAAAAAACTTTCAAAATCTTCTGGACAAGGACTTGTTGAATTTAAAAATGAATTAACCCTTATATCTAAACTCCAGCACACAAATTTGGTTCGACTACTTGGTCACTGCATTCATGAAGAAGAGCGGATTTTGATCTATGAATATATGCCTAACAAAAGCTTGGATTTCTTTTTATTTGATTCTACTCAAAGTCAGTTGCTGGATTGGAGTAAGCGTTTTAGCATAATAGAAGGAATTGCTCAAGGATTATTGTACCTTCACAAATATTCAAGACTTAGAGTGATTCACAGAGATTTGAAGGCTAGCAACATACTCCTTGATGAGAATTTGAACCCCAAAATTTCTGATTTCGGTATAGCAAAAATGTTCACACAACATGTTTCTGAAGCAAATACCAGCAGGATTGTTGGGACATATGGGTACATGTCTCCAGAGTATGCTATGGAAGGAATTTTTTCTACAAAATCTGATGTGTATAGTTTTGGAGTGTTACTCTTTGAAATTGTTAGCAGTAAAAGAAACAATAGCATCTACACCGAAGAACAACCACTCAATCTAGTTGGTCATGCCTGGGAGCTGTGGAAAGAAGGCGAGGCTCTTAAGTTGGTGGATCCAGCATTAAAAGATTCATTTTCAGAGGATGAAGTTCTAAGATGTATTCATGCTGGTCTATTATGTGTGGAGGAAAATGCAGATGATCGCCCCTCCATGTCCAACATTGTATCTATGTTAACAAACAAAAGTAAAGTGACTTCTTTGCCTAAAAAACCTGCATATTATGTTAGAAGAAAAGTCATTGGAGAAGAAACATCTACTAAAGAATTTGGGGTAGAAGACTCTATATGA 2343 0.3956 MGCSEQGKPHVLLVLTYLWLWWWWTTCIHVEAGNDSLKPGDTLNATAEAPLCSENGKFCMSFGLSTDGEDAVYLNIYAQKKDEWVVWVANRNQPVDSNSAVLSLNHSGVLKIESQDGEPIILFSTPQPINNIVATLLDTGNFVLQRLHPNGSTMGVLWESFDFPSDTLLPEMKLGVNHKTGHNWTLVSWLSKFVPTPGPFRLEWEAKEKQLIIKRREQVYWTSGKRLEHILGQGQYEIVSNENEEFFRLKSSTEELTKWTLLSTGQLINRNGDDVARADKCYGYNTDEGCQKWEEIPSCRHRGDQFELKQGYPNLNMKRDEQNSSYGISDCQAICWRNCTCVGFAPYHDNETGCIFFLWDSMKGTNFASEGDKFYMLVRSNHQNRIKMWIWAIVAVGATILIICLCILCRVLKRKYVLKDLENKRNGMETEKQDLAASSRPFSADKLEVYLKEEHDLKVFSYASIIEGTNDFSSKNMLGKGGFGEVYKGILSTRQEVAVKKLSKSSGQGLVEFKNELTLISKLQHTNLVRLLGHCIHEEERILIYEYMPNKSLDFFLFDSTQSQLLDWSKRFSIIEGIAQGLLYLHKYSRLRVIHRDLKASNILLDENLNPKISDFGIAKMFTQHVSEANTSRIVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLFEIVSSKRNNSIYTEEQPLNLVGHAWELWKEGEALKLVDPALKDSFSEDEVLRCIHAGLLCVEENADDRPSMSNIVSMLTNKSKVTSLPKKPAYYVRRKVIGEETSTKEFGVEDSI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5943g00001 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 190 IPR036426 -
Mupr5943g00001 780 Gene3D Phosphorylase Kinase; domain 1 432 547 - -
Mupr5943g00001 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Mupr5943g00001 780 SMART serkin_6 472 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5943g00001 780 Pfam Protein tyrosine and serine/threonine kinase 475 743 IPR001245 GO:0004672|GO:0006468
Mupr5943g00001 780 Coils Coil 418 438 - -
Mupr5943g00001 780 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 131 759 - -
Mupr5943g00001 780 PIRSF SRK 270 779 IPR024171 GO:0004674
Mupr5943g00001 780 PIRSF SRK 6 279 IPR024171 GO:0004674
Mupr5943g00001 780 CDD STKc_IRAK 478 745 - -
Mupr5943g00001 780 SMART blect_4 42 164 IPR001480 -
Mupr5943g00001 780 Gene3D Transferase(Phosphotransferase) domain 1 548 758 - -
Mupr5943g00001 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 548 751 - -
Mupr5943g00001 780 Pfam D-mannose binding lectin 85 189 IPR001480 -
Mupr5943g00001 780 ProSiteProfiles PAN/Apple domain profile. 299 380 IPR003609 -
Mupr5943g00001 780 Pfam PAN-like domain 319 356 IPR003609 -
Mupr5943g00001 780 ProSiteProfiles Bulb-type lectin domain profile. 34 157 IPR001480 -
Mupr5943g00001 780 ProSiteProfiles Protein kinase domain profile. 472 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5943g00001 780 ProSitePatterns Protein kinases ATP-binding region signature. 478 501 IPR017441 GO:0005524
Mupr5943g00001 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform A 28 161 - -
Mupr5943g00001 780 SUPERFAMILY Protein kinase-like (PK-like) 456 760 IPR011009 -
Mupr5943g00001 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 439 547 - -
Mupr5943g00001 780 Gene3D - 28 161 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5943g00001 Mupr-Chr5943 11366 16234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5943g00001 460 761 Receptor kinase-like Gene Family AT3G45860 57.895 1.32e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr5943g00001 PK_Tyr_Ser-Thr 5.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5943g00001 - - gmx:100816869 1194.1