Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr593g00011 ATGGCGACAGAGAGAACAGTAACTTCAAACCCTAGCAACGGAGAACGACCTAAGGTACTAGTCATAACGGGACCCACCGGTTCCGGCAAGTCGAAGCTTGCCATTGATCTAGCCTCTCACTTTCCGGTCGAAGTCATCAACGCCGATTCCATGCAGGTCTACCGCGGCCTCGATGTTCTCACCAACAAACTCCCTCTCTCCCACCAAAACGGTACCACCGTGTCCTCCCCGCACCCGATTTTTCCCCCTCCGTTTCTGAAATCGCGTTTCGAATTTGTTGCAGGAGTGCCGCATCATCTCTTGGGTACCGTAAGCCCCAACGTGGAATTCACCGCTAAAGCGTTTCGGGATTCCGCTATTCCCATCATCGATGATATATTGGCTCGTAACCACTTGCCTCTCATAGTTGGGGGCACAAATTACTATATCCAGGCTCTTGTGAGTCCGTTTCTTCTAGATGATTCCGCAGAAGATATGGATGAAAGCTGTTTGGGTGACCCACCTGGCGTCACGCCGTCTGATGACAGTTCCATTGCTGAAAATGATTGTTCAAACAATAGTTATGACCTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGGATTCATCCAAATAACCATAGAAAGGTTGGGAGTATAAATCAATATATTAGTTTGTACACTCGCACTGGTGTTCTTCCTAGCAAAATTTTTCAAGGGAAGGCAGCAGAGAAGTGGGGTCAAGTTGATAACTTAAGATATGATTGTTGTTTTATATGTGTGGATGCATCACTCCCTGTACTGGACAGATATGTAGAGCAGAGGGTGGATTGCATGATGGATGATGGATTACTCAATGAAGTCTATGACATTTACAATTTGAATGCAGATTATACTAGAGGTTTGCGGCAGGCTATTGGTGTCCGTGAATTTGAGTCTCTTCTTAGAACTAGTGTTGTCAAAGACATGTATGAAAGAGAGAGGGAATTGACTGAAGGAACCGGCATAGAAAAGGGAGGGACATTGTTTGATGGTAATTTAATGGAGTTGGTCAGATCTTCCTCTAATATTGAATCCACAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGGTTAATACCCGGAGACTTGTTCGCCGTCAGAAGAGGATGCTCAGTCGACTGCAAAAGCTGTTTGGTTGGTACATACACTATGTTGATTCCACAGAATCAATATCAAGCAAATCGGAAGCTGTATGGAGACACCAAGTGGTTGAATCTGCTGTGACGATAGTTCAATCTTTCCTGAATGAGAATGGAAGCTTGCCATCCACCTTTGGGACGTCAAATGACACTGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGCGGAAATCGTGTGCTTAGAGGATTACATGAATGGGAACAACACAAACAAGGTCGTGGCCACCGAAAACGTATTTCTAGTCTTAAGAGCAAGGCACAAGTTCCTGGTTTCATGGAAGACAAGGTGGAGTATTCTGAGTGTGAACAGTGA 1515 0.4449 MATERTVTSNPSNGERPKVLVITGPTGSGKSKLAIDLASHFPVEVINADSMQVYRGLDVLTNKLPLSHQNGTTVSSPHPIFPPPFLKSRFEFVAGVPHHLLGTVSPNVEFTAKAFRDSAIPIIDDILARNHLPLIVGGTNYYIQALVSPFLLDDSAEDMDESCLGDPPGVTPSDDSSIAENDCSNNSYDLLKDIDPVAANRIHPNNHRKVGSINQYISLYTRTGVLPSKIFQGKAAEKWGQVDNLRYDCCFICVDASLPVLDRYVEQRVDCMMDDGLLNEVYDIYNLNADYTRGLRQAIGVREFESLLRTSVVKDMYERERELTEGTGIEKGGTLFDGNLMELVRSSSNIESTILLEEAIEKVKVNTRRLVRRQKRMLSRLQKLFGWYIHYVDSTESISSKSEAVWRHQVVESAVTIVQSFLNENGSLPSTFGTSNDTGMKIIQRDLWTQYICKACGNRVLRGLHEWEQHKQGRGHRKRISSLKSKAQVPGFMEDKVEYSECEQ 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr593g00011 504 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 72 IPR039657 -
Mupr593g00011 504 Gene3D Classic Zinc Finger 446 492 - -
Mupr593g00011 504 Gene3D - 17 445 IPR027417 -
Mupr593g00011 504 FunFam tRNA dimethylallyltransferase 446 489 - -
Mupr593g00011 504 Pfam IPP transferase 52 376 - -
Mupr593g00011 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 288 IPR027417 -
Mupr593g00011 504 Hamap tRNA dimethylallyltransferase [miaA]. 19 403 IPR018022 GO:0008033
Mupr593g00011 504 Gene3D - 173 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr593g00011 Mupr-Chr593 94196 97813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr593g00011 10 485 C2H2 Transcription Factor Family AT2G27760 53.673 3.35e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr593g00011 K00791 - gmx:100792690 806.208