Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5938g00001 ATGTCTCAGGGAAGCCTTGAAGTTTTTCTTGTCAATGCCAAGGGCCTTAATAACACTGATTTTCTTGGTAAAATGGACCCTTACGTGATCCTCATATGTCGCACTCAGGAACAAAAAAGCAATGTTGCCACAGCTCAAGGAAGTGAACCAGAATGGAACGAGAATTTTGTGTTCAACGTGTCTGAAGGCGTTTCCGATCTGAAGTTGAAGATCATGGACAAGGATTCCATGACGGCTCATGATTTAGTTGGAGAAGCTACCATTCCACTTGCTGCATTGTTTACTGAAGGAACTATCCCACCTACTTCATACAACGTTGTCAAAGATGGCCAATTTTGCGGGGAGATTAAAGTTGGCCTCACTTTTACGCCTCAGGTTTTGTCTTTTTAA 390 0.4256 MSQGSLEVFLVNAKGLNNTDFLGKMDPYVILICRTQEQKSNVATAQGSEPEWNENFVFNVSEGVSDLKLKIMDKDSMTAHDLVGEATIPLAALFTEGTIPPTSYNVVKDGQFCGEIKVGLTFTPQVLSF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5938g00001 129 Gene3D C2 domain 2 125 IPR035892 -
Mupr5938g00001 129 PANTHER C2 DOMAIN-CONTAINING 1 124 - -
Mupr5938g00001 129 SMART C2_3c 5 102 IPR000008 -
Mupr5938g00001 129 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Mupr5938g00001 129 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
Mupr5938g00001 129 Pfam C2 domain 4 96 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5938g00001 Mupr-Chr5938 2867 3563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5938g00001 4 119 C2H2 Transcription Factor Family AT4G21160 28.448 7.54e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5938g00001 - - gmx:100782974 221.861