Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5937g00003 ATGGGGAGCATTGCTGGTATAAACGTTGGTACTACGAGTGAGAGAAAATCCAAGGGACGGAGAAACAACAAAGATGTTGTTCAAGGTACTACTCGAGAAGGTTCAAGCTTTTGGAGTAAAATTGGAATGTTGCTAGGTTGCATGCCTTTGAATTCCAAAAGGAGAGGCTCCTCCAGTGACAAAAGAAAACAAGCAAGAGAAGTTACAAAAGATACTATTAGACGACACCAACCCGGTACTTCAAGATCCTCTTCCAGCAAAAGGTCAAGAAGCTATGCAAGATCATGTAGTCCCAACATAAACCAGGAATTACTTATAGCTTCTTCCCTTCTTCGAAGGTTCACCTTTAATGATCTTCAGTTGGCAACAAGGACTTTTAAGGCTGAGAATTTCCTTGGTGAGGGAGGCTTTGGAATTGTGTTGAAAGGTTGGGTCAGTAAGAATGGAAACTATGCAGCAAGGCCTGGAATGGGGATTCCAGTTGCAGTGAAGAGTCTCAACATACATGAATTTCAGGATCTTAAGGAATGGCTTGGTGAAATTAGTTATCTCAGTGAACTCCATCATCCAAATCTGGTTAAATTGATTGGCTTTTGCATAGAGGATGACAAGAGGCTACTGGTACATGAGTGTATGTCTGAAGGAAGCTTAGATAAGCATTTGTTCAGGACAGAAAATGTGAACCTTCCGTGGTCTATCAGAATGAAAATTGCGATTGGTGCTGCAAAGGGCCTTGCATTTTTGCATGAGGAAGCTTCAAGTCCAGTGATATTTAGAGACTTCAAAACGTCAAATATCCTATTGGATGAGAACTACAATGCAAAACTTTACGATTTTGGACTTGCTGAAGATGCTCTAGAGGGAGATGCAAGTCATGTGTCAACTCGAGTAATGGAACAAGGCTATGCAGCCCCTGAGTATGCGATGGCAGGACACCTTACATCCAAGAGTAACGTCTATGGGTTTGGGGTGATTCTACTTGAACTACTGACAGGTAGAAGGGCCGTGGAGAAAAGAATGCCAAGGGAGGAGCAAAACTTGGTGGAATGGTTGCGCCCCCTTCTTAGGAACAAAGAAAATTTCAACAATTTGATGGATCCTAGACTTGAAGGTCAATACTCAGTGAAAGGTGCTCACAAGGCAATGAGGTTGGCCATTCACTGTGTTCGCTCTAACCCAAAAGCAAGACCCCTTATGAGTGAAGTGGTTCGTGTGTTGACGTCTTTGCCTATTCATGATGACATGGATGGTCACCCTGGTCCCTCAACCTCTCTTCAGAGAATGCATGTAGGCCCCTCCAGCTCCAACTATGGTGCTAACAAGCATAGCCTCGAAACTGCTCCTGCACAAAACCTTCCATGGCACTTTCATGACTCACCACTGAGCCAAGACTATCCTCTACCTCCACCAACCCCTAGATTTGGACAACCATGA 1434 0.4393 MGSIAGINVGTTSERKSKGRRNNKDVVQGTTREGSSFWSKIGMLLGCMPLNSKRRGSSSDKRKQAREVTKDTIRRHQPGTSRSSSSKRSRSYARSCSPNINQELLIASSLLRRFTFNDLQLATRTFKAENFLGEGGFGIVLKGWVSKNGNYAARPGMGIPVAVKSLNIHEFQDLKEWLGEISYLSELHHPNLVKLIGFCIEDDKRLLVHECMSEGSLDKHLFRTENVNLPWSIRMKIAIGAAKGLAFLHEEASSPVIFRDFKTSNILLDENYNAKLYDFGLAEDALEGDASHVSTRVMEQGYAAPEYAMAGHLTSKSNVYGFGVILLELLTGRRAVEKRMPREEQNLVEWLRPLLRNKENFNNLMDPRLEGQYSVKGAHKAMRLAIHCVRSNPKARPLMSEVVRVLTSLPIHDDMDGHPGPSTSLQRMHVGPSSSNYGANKHSLETAPAQNLPWHFHDSPLSQDYPLPPPTPRFGQP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5937g00003 477 ProSitePatterns Protein kinases ATP-binding region signature. 132 164 IPR017441 GO:0005524
Mupr5937g00003 477 MobiDBLite consensus disorder prediction 55 77 - -
Mupr5937g00003 477 MobiDBLite consensus disorder prediction 78 95 - -
Mupr5937g00003 477 MobiDBLite consensus disorder prediction 463 477 - -
Mupr5937g00003 477 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 212 418 - -
Mupr5937g00003 477 SUPERFAMILY Protein kinase-like (PK-like) 106 407 IPR011009 -
Mupr5937g00003 477 MobiDBLite consensus disorder prediction 413 477 - -
Mupr5937g00003 477 MobiDBLite consensus disorder prediction 51 95 - -
Mupr5937g00003 477 PANTHER OS01G0588500 PROTEIN-RELATED 81 408 - -
Mupr5937g00003 477 MobiDBLite consensus disorder prediction 426 447 - -
Mupr5937g00003 477 Pfam Protein tyrosine and serine/threonine kinase 128 405 IPR001245 GO:0004672|GO:0006468
Mupr5937g00003 477 Gene3D Phosphorylase Kinase; domain 1 101 211 - -
Mupr5937g00003 477 ProSiteProfiles Protein kinase domain profile. 126 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5937g00003 477 MobiDBLite consensus disorder prediction 1 32 - -
Mupr5937g00003 477 Gene3D Transferase(Phosphotransferase) domain 1 212 417 - -
Mupr5937g00003 477 FunFam Serine/threonine-protein kinase BIK1 94 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5937g00003 Mupr-Chr5937 32816 37295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5937g00003 45 426 Glycoside Hydrolase AT3G07070 39.950 4.52e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr5937g00003 PK_Tyr_Ser-Thr 5.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5937g00003 - - ccaj:109817012 620.542