Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5937g00001 ATGGGGAGCATTGCTGGTATTAATGTTAGTAGTACGAGTGCGGGAAAATCCAAGGGATGGAGAAACAACAAAGATGTTGTTCAAGATACTACTCAAGAAGGTTCAACATTTTGGAGGAATCTCAGGATTTTGCTAGGTTGCATGGCTTTGAATTCCAAAGAGGGAGGCTCCTCCAGTGACAAAAGAGAACAAGGAAGAAAAGTTACAAAACATAATGTTACACGACACCAACCAGTTACTCCAAGATCGCCCCCATCTAGCAGAAGGTCAAGAAGCTGTGCAAGATCGTGTCCTCCCAACTTAAACCAGGAATTACTTCTAGCTTCTCCCCTTCTTCGAAAGTTCACCTTTAATGATCTTAAGTTGGCAACAAGGAATTTTAGGACTGAGAATTTCCTTGGTGAGGGGGGTTTTGGAACTGTGTTGAAAGGTTGGATCAGTCAGAATGGGAACTATGCAGCAAGGCCTGGAATGGGCATTCCAGTTGCAGTGAAGGGTCTCAATACAAGTGGATTTCAGGGTCATCAGGAATGGCTTGCTGAAATTAGTTATCTCAGTGAACTCCATCATCCAAATCTGGTTAAATTGGTTGGCTTTTGCATAGAGGATGACAAAAGGCTGCTGGTATATGAGTATATGTGTCGAGGAAGCTTAGAGGAGCACCTGTTCACGAGAAATATGCGCCTTCCGTGGCCTATTAGACTCAAAATTGCGATTGGTGCTGCAAAGGGCCTTGTGTTTTTGCATGAGGAAGCTACAAGGCCAGTGATATTTAGAGACTTCAAGACATCAAATATCCTTTTGGATATGAACTACAATCCAAAACTTTCGGATTTTGGACTTGCTAAAGATGCTCCAGTGGGAGATGCAAGTCATGTGTCAACTCAAGTAATGGGAACAGAAGGCTATGCAGCCCCTGAGTATGTGATGACAGGACACCTTACTTGCAAGAGTGATGTTTATAGCTTTGGGGTGGTTCTACTTGAAATGCTGACAGGTAGAAGAGCTGTGGAGGAAAGAATGCCCGAGAAGGAGCAAAACTTGGTGGAATGGTTGCGTCCCCTTCTTAGGAACAAAGCAAATTTCAACTATCTGATGGATCCTAAACTTGAAGGTCAATACTCAGTGAAAGGTGCTCACAGGGCAATGAGGTTGGCTACTCACTGTATTCGCTCTGACCCAAAAGCAAGACCCCTTATGAGTGAAGTGGTTCGTGTGTTGATGTCTTTGCCTATTCATGATGACATGGATGGTCAACCTGTTCCCTCAACCTCACTTCAGAGAATGCATGTAGGCCTCTCCAACTCCAACAATGGTGCTATCAAGTATAGCCTCGGAACTTCTCCAACACCAAAAGTTCCAAGGGGCTTTCAAGCCTCGCCAGTGAGCCAAGGCTATCCTCTACCTCCACCAAAACCTAGTGTTGGACCTTCCTCCAGCCCCAAGTGTTGGACAACCATGAGATGA 1467 0.4479 MGSIAGINVSSTSAGKSKGWRNNKDVVQDTTQEGSTFWRNLRILLGCMALNSKEGGSSSDKREQGRKVTKHNVTRHQPVTPRSPPSSRRSRSCARSCPPNLNQELLLASPLLRKFTFNDLKLATRNFRTENFLGEGGFGTVLKGWISQNGNYAARPGMGIPVAVKGLNTSGFQGHQEWLAEISYLSELHHPNLVKLVGFCIEDDKRLLVYEYMCRGSLEEHLFTRNMRLPWPIRLKIAIGAAKGLVFLHEEATRPVIFRDFKTSNILLDMNYNPKLSDFGLAKDAPVGDASHVSTQVMGTEGYAAPEYVMTGHLTCKSDVYSFGVVLLEMLTGRRAVEERMPEKEQNLVEWLRPLLRNKANFNYLMDPKLEGQYSVKGAHRAMRLATHCIRSDPKARPLMSEVVRVLMSLPIHDDMDGQPVPSTSLQRMHVGLSNSNNGAIKYSLGTSPTPKVPRGFQASPVSQGYPLPPPKPSVGPSSSPKCWTTMR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5937g00001 488 MobiDBLite consensus disorder prediction 74 96 - -
Mupr5937g00001 488 Gene3D Transferase(Phosphotransferase) domain 1 213 419 - -
Mupr5937g00001 488 PANTHER OS01G0588500 PROTEIN-RELATED 78 409 - -
Mupr5937g00001 488 Gene3D Phosphorylase Kinase; domain 1 90 212 - -
Mupr5937g00001 488 MobiDBLite consensus disorder prediction 1 23 - -
Mupr5937g00001 488 FunFam Serine/threonine-protein kinase BIK1 96 212 - -
Mupr5937g00001 488 ProSitePatterns Protein kinases ATP-binding region signature. 133 165 IPR017441 GO:0005524
Mupr5937g00001 488 MobiDBLite consensus disorder prediction 442 488 - -
Mupr5937g00001 488 ProSiteProfiles Protein kinase domain profile. 127 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5937g00001 488 SUPERFAMILY Protein kinase-like (PK-like) 113 434 IPR011009 -
Mupr5937g00001 488 MobiDBLite consensus disorder prediction 53 96 - -
Mupr5937g00001 488 FunFam Serine/threonine-protein kinase PBS1 213 422 - -
Mupr5937g00001 488 Pfam Protein tyrosine and serine/threonine kinase 130 406 IPR001245 GO:0004672|GO:0006468
Mupr5937g00001 488 CDD STKc_IRAK 133 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5937g00001 Mupr-Chr5937 10079 15017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5937g00001 113 427 Glycoside Hydrolase AT3G07070 49.390 1.61e-104 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr5937g00001 PK_Tyr_Ser-Thr 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5937g00001 - - ccaj:109817012 653.284