Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5930g00002 ATGGCCGAATTACTTGTTTTCAGCCTCGCAGAATCACTGATAGGGAAGCTCACTTCTCGTGCTGTTGAAGAAGCTTCTCTGGCGCTGGGTGTGTCCCACGATCTACAACAAATGAAAGAGACTACGGCACTCATCAAAGCTTTCCTGTTAGATGCTGAGCAAAAGACGCAGCAGAACAACGCGTTGACCGAATGGCTGAAACTGATCAAGCACGTGTTATCCCACGCCGAAAACATAGTCGACGATTTTGAGTGCGAAGCATTGCGGAAGCACGTTGTCAGCACTCACGGTAGCGTCTCGAGGAAGGTACGTCGTTTCTTCTCAACTAGTAATCCTTTCCTTTATCGTCTTAGAGTGGCGCGTGAGATAAAAGACATCAACAAGAGGTTGGACAAAGTTGCGGCTCAGAGGAATATGTTTGGCCTTCAACTCAATGAAATTGATACACGTGTCGTGCATTCAAGGAAAATGACTCATTCATATGTAAATGGATCAAATGTGATAGGAAGGGAAGATGACAAACAGAAAATAATAAAGCTTTTGCTACAAGGTGGTCATGACAAACGTCTCTCTGTTATCTCCATTGTGGGAATAGGAGGCTTGGGAAAGACTACACTTGCAAAGTTGGTGTTTAATGACACGAGTATTGATGAATGTTTTCCGTTGAAGATGTGGGTGTGTGTCTCTAATGATTTTCAACTTAGGAATGTTCTTATTAAAATCCTCAATTCTGCTCCTAACCCCACTATAGAAAAGTTTAAAAACTTTGAGACGGAACAACTTCAAAATCATTTGAGAACTACACTTCAAAGTCAGAAGTTCTTGCTCGTTTTGGATGACGTGTGGAACGAGGATCGTGCCAGATGGGATGAATTGAAGGAAATCATAGACGTAGGTGTTGAAGGGAGTAAAATCCTAGTGACTACTCGTAGCCACTCAACAGTTTCCTTGATGGGCACTAAATCCTCTAATTCATACCTTCTACAAGGCCTTTCTCAAGAGGATTCCTTCTCTCTGTTTGTCAAATCGGCTTTTGAAGAAGGAGAAGAGATAAAACATCCACAATTGTTGGAGATTGGGAGAGAAATTGTGAAAAAATGTGCAGGGATACCGTTGGCAGTGAAAACTTTAGGAAGTTCACTATTCTCAAGGGATGATAGAGAAGAGTGGGAGTGTGTGAGAGATAATGCGATTTGGAATTTACCACAAAATGAAAAAGACATTTTGCCTGCTCTTCAATTAAGTTACGATCAACTACCTTCATATTTAAAGCGATGCTTTGCTTGCTTCTCTCTTTTCCCTGAGGACAATGATTTTACTAGTTTTTATGTTGCTAGGTTGTGGGAGGCACTTGGTTTTCTTCCACCTCCAAAGGAAAGTGAAACAATCAATGATGTTGCCAGTCAATTTTTGCATGAGCTATCGTCAAGATCTTTTCTTACAGATTTTCTTGACATCGGAAGAACTTGCAGATTTAAACTACATGATTTAGTCCGTGAACTTGCAGTATATGTTGCCAATGGTGAGTTTCAAATATATTCCAACGGAAAAGAAATAACCGAACATGCCCAACATTTGTCATTCGCTGAAAATAATATGCTTGGCCAAGTTCTCGTTCCCATAGGTCTAAGAACTATAATTTTTCCCATGGAAGCCACCAATGAAGCTTTCTTGAATACATTGGTGTCAAGATGCAAATACTTGAGGTTTTTAGACTTAGGTAATGACAAACTTAAGGGACTCCCTGATTCAGTGTGCAAACTCCAAAATTTGCAAACTTTGGACCTCCGCGGGTGCATAAAGCTACAAGAATTGCCCAAAGGAATAAGTAAACTAATTAGCCTTCGTCAGCTGCTTATAACCACAAGGCAACCTGATTTTCCAGAAAAAGAGATTGCAAATTTGACATTTTTAGAAGATTTAAGATTCTATTATTGTGATAAATTGGAGTCATTGTTTGAAGCCATACAACCTCGCAGTCTTAAGTTTTTGCATTTTTCTGGTTGTGGGAGTTTAAAGTCTTTGTCGTTTCATGTCATTACAAATTTAGAAAGTTTTGTTATCTTCGAATGTGGAAAGTTTGAATTGACAATGGGCCTTGGCAACCAAATCCCCGATTCACGGTTAAAGGTAGTTATTCTTGGACGTTTGGCACAGCTGGTCACTTTGCCTCAGTGGTTGAAAGGATCTATGAACACATTACATTCCTTGGTAATTGTTGGGTGCGAGAATCTTGAGGAGCTTCCTGAGTGGCTGTCATCTCTGACTTGTCTCAAACATCTTAAAATTGATTACTGTCCAAAGCTACTCTTATTCCCTGATAACATGCATCACCTCACAAACCTTGAACATTTAGAAATTAATGGTTGTCCTGAATTATGCAAAAGATGCCAGCCAGGAGTTGGACAGGATTGGCACAAAATATCGCACATAAAAAAAGTCATCATTGGTGAACCGGAAGAGTAG 2466 0.4011 MAELLVFSLAESLIGKLTSRAVEEASLALGVSHDLQQMKETTALIKAFLLDAEQKTQQNNALTEWLKLIKHVLSHAENIVDDFECEALRKHVVSTHGSVSRKVRRFFSTSNPFLYRLRVAREIKDINKRLDKVAAQRNMFGLQLNEIDTRVVHSRKMTHSYVNGSNVIGREDDKQKIIKLLLQGGHDKRLSVISIVGIGGLGKTTLAKLVFNDTSIDECFPLKMWVCVSNDFQLRNVLIKILNSAPNPTIEKFKNFETEQLQNHLRTTLQSQKFLLVLDDVWNEDRARWDELKEIIDVGVEGSKILVTTRSHSTVSLMGTKSSNSYLLQGLSQEDSFSLFVKSAFEEGEEIKHPQLLEIGREIVKKCAGIPLAVKTLGSSLFSRDDREEWECVRDNAIWNLPQNEKDILPALQLSYDQLPSYLKRCFACFSLFPEDNDFTSFYVARLWEALGFLPPPKESETINDVASQFLHELSSRSFLTDFLDIGRTCRFKLHDLVRELAVYVANGEFQIYSNGKEITEHAQHLSFAENNMLGQVLVPIGLRTIIFPMEATNEAFLNTLVSRCKYLRFLDLGNDKLKGLPDSVCKLQNLQTLDLRGCIKLQELPKGISKLISLRQLLITTRQPDFPEKEIANLTFLEDLRFYYCDKLESLFEAIQPRSLKFLHFSGCGSLKSLSFHVITNLESFVIFECGKFELTMGLGNQIPDSRLKVVILGRLAQLVTLPQWLKGSMNTLHSLVIVGCENLEELPEWLSSLTCLKHLKIDYCPKLLLFPDNMHHLTNLEHLEINGCPELCKRCQPGVGQDWHKISHIKKVIIGEPEE 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5930g00002 821 Gene3D - 148 324 IPR027417 -
Mupr5930g00002 821 Gene3D - 10 124 - -
Mupr5930g00002 821 PANTHER DISEASE RESISTANCE PROTEIN RP 46 787 IPR044974 GO:0006952
Mupr5930g00002 821 Gene3D - 330 420 IPR042197 -
Mupr5930g00002 821 PRINTS Disease resistance protein signature 192 207 - -
Mupr5930g00002 821 PRINTS Disease resistance protein signature 268 282 - -
Mupr5930g00002 821 PRINTS Disease resistance protein signature 367 381 - -
Mupr5930g00002 821 PRINTS Disease resistance protein signature 586 602 - -
Mupr5930g00002 821 Pfam Rx N-terminal domain 11 98 IPR041118 -
Mupr5930g00002 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 429 IPR027417 -
Mupr5930g00002 821 CDD RX-CC_like 12 134 IPR038005 -
Mupr5930g00002 821 Gene3D Ribonuclease Inhibitor 522 814 IPR032675 -
Mupr5930g00002 821 FunFam Probable disease resistance protein At1g61300 149 323 - -
Mupr5930g00002 821 Pfam NB-ARC domain 170 417 IPR002182 GO:0043531
Mupr5930g00002 821 SUPERFAMILY L domain-like 493 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5930g00002 Mupr-Chr5930 10469 13006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5930g00002 190 793 WRKY Transcription Factor Family AT5G45050 22.939 1.32e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5930g00002 - - gmx:100780033 1253.43