Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5914g00002 ATGGCAATGGCACCCTCAACTCCCACTAGCGGGTCTGGCAAGAAGGTTAGAAAGCCTTATACTATTACCAAGTCTAGGGAGAGTTGGTCTGAAGAAGAGCATGATAAGTTTCTCGAAGCTCTTCAACTATTTGATAGAGATTGGAAGAAAATTGAAGATTTTGTTGGTTCAAAAACAGTTATTCAGATTAGAAGTCATGCCCAGAAGTACTTTTTGAAAGTTCAAAAGAACGGAACAGTAGCACATGTTCCTCCTCCTCGGCCTAAGCGCAAAGCTACTCATCCTTACCCACAAAAGGCATCCAAAAATGTTGTTTCAATTTTGTTCGATATGAAGAGTATATGCAATGGCTGTACTAAATGGAACTTTCCACCACTTATTATGCTATATGACGTTACTGATTCAGCTGATATTGGATCAAATGGGATAACACGAATTGGCCAAAGTAGTCTTAGTGGTGTTGTGAACTCTACTAGAAATGCTACCGAGATGCCACAACAAGGGAAACAGGCTCCGGTGCTTCATGGTTTGCCAGATTTTGCTGAAGTTTACAGCTTCATTGGAAGTGTTTTTGATCCGGACACAAAAGGCCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAAAAACCTCACTGTCAACATATCTAGTCCTGACTTTGAGCCCGTTAGGAAGGCCATGTCATCATACGATGCCAATACAAATACAGTAGGAGTTACTGCAGGAATTGACATCAAAAAGCAGGCAAATGATCTATCATGTCAAACAGCTTGA 801 0.4032 MAMAPSTPTSGSGKKVRKPYTITKSRESWSEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKATHPYPQKASKNVVSILFDMKSICNGCTKWNFPPLIMLYDVTDSADIGSNGITRIGQSSLSGVVNSTRNATEMPQQGKQAPVLHGLPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETVLLLMKNLTVNISSPDFEPVRKAMSSYDANTNTVGVTAGIDIKKQANDLSCQTA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5914g00002 266 SMART sant 25 73 IPR001005 -
Mupr5914g00002 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Mupr5914g00002 266 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Mupr5914g00002 266 ProSiteProfiles SANT domain profile. 24 77 IPR017884 -
Mupr5914g00002 266 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Mupr5914g00002 266 CDD SANT 28 71 IPR001005 -
Mupr5914g00002 266 FunFam protein REVEILLE 6 isoform X1 28 76 - -
Mupr5914g00002 266 Gene3D - 29 76 - -
Mupr5914g00002 266 MobiDBLite consensus disorder prediction 1 26 - -
Mupr5914g00002 266 MobiDBLite consensus disorder prediction 1 16 - -
Mupr5914g00002 266 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 73 IPR006447 GO:0003677
Mupr5914g00002 266 Pfam Myb-like DNA-binding domain 26 71 IPR001005 -
Mupr5914g00002 266 PANTHER SWI/SNF COMPLEX-RELATED 12 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5914g00002 Mupr-Chr5914 12053 15180 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr5914g00002 Myb_DNA-binding 9.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5914g00002 - - gmx:100783482 416.772