Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5914g00001 ATGGCGGCGGCAGCAGCTCGCCCTCTGGTCTCCGTTCAAACCATAGAGGGCGATGCATCCCCCACCGTCCCTCTCCCCGACGTAATGAAGACCTCCATTCGCCCCGACATTGTCAACTTCGTCCACTCCAACATTTCCCGCAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAGACCTCCGCCGAGTCCTGGGGCACTGGCCGCGCTGTATCCCGAATCCCCCGCGTCCCCGGCGGCGGCACCCACCGCGCCGGCCAGGGAGCCTTCGGCAACATGTGCCGCGGCGGCCGCATGTTCGCGCCGACAAAGATCTGGCGCCGCTGGCATCGCAAGATAAACGTCAACCAGAAGCGCTACGCCGTCGTTTCCGCCATCGCCGCCTCCGCAATCCCCTCGCTCGTCCTCGCCCGCGGCCACCGCATCGAGACCGTCCCGGAACTCCCTCTGGTCGTCAGCGACACTGTGGAAGGCGTCGAGAAAAGCAAGGAAGCGGTGAAAGTTCTGCAGAAGATCGGCGCGTTCCCCGACGCCGAGAAGGCGAAAAACAGCCACGGCATTCGCGCCGGCAAGGGGAAAATGAGGAACCGCAGGTACATTTCGCGGAAGGGTCCTCTTATCGTGTACGGAACCGAAGGTGCTAAAGCCGTTAAAGCCTTCAGGAACATTCCGGGTATTGAGGTGGCAAATGTTGATAGGCTCAACCTTCTCAAATTGGCACCCGGTGGCCACCTCGGGAGGTTTATCATTTGGACCAAATCCGCATTCGAGAAGCTGGACTCTATTTATGGGTCGTTCGATAAGGCCTCCGAGAAGAAAAAGGGTTACCTCCTTCCTAGGCCCAAGGTTGTTAACTCTGACTTGGCCCGGATTATCAACTCCGACGAGGTCCAGTCCATGGTCAGGCCCATTAAGAAAGAGGTTAATAGAGCTACTCTCAAGAAGAACCCTCTGAAGAACCTAAATATCATGTTGAAGCTCAACCCCTATGCTAAGACTGCTAAGAGGATGGCTATTCTCGCTGAGAAGCACCGCGCAGCGGCTAAGAAGGAGAAGCTTGATAAGAAGCGCAACATTGTCCCCAAGGAGGATACCGCTGCTATTAACGCTGCTGGAAAAGCATGGTATCAAACCATGGTGTCCGACTCTGATTATGCTCAATTTGACAACTTTTCTAAGTGGCTGGCCGTTTCA 1203 0.5711 MAAAAARPLVSVQTIEGDASPTVPLPDVMKTSIRPDIVNFVHSNISRNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPELPLVVSDTVEGVEKSKEAVKVLQKIGAFPDAEKAKNSHGIRAGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGIEVANVDRLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYLLPRPKVVNSDLARIINSDEVQSMVRPIKKEVNRATLKKNPLKNLNIMLKLNPYAKTAKRMAILAEKHRAAAKKEKLDKKRNIVPKEDTAAINAAGKAWYQTMVSDSDYAQFDNFSKWLAVS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5914g00001 401 MobiDBLite consensus disorder prediction 52 70 - -
Mupr5914g00001 401 FunFam 60S ribosomal protein L4 4 305 - -
Mupr5914g00001 401 Pfam 60S ribosomal protein L4 C-terminal domain 277 350 IPR025755 -
Mupr5914g00001 401 Gene3D - 4 305 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mupr5914g00001 401 PANTHER 60S RIBOSOMAL PROTEIN L4 5 395 IPR045240 -
Mupr5914g00001 401 SUPERFAMILY Ribosomal protein L4 9 264 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mupr5914g00001 401 ProSitePatterns Ribosomal protein L1e signature. 117 143 IPR013000 -
Mupr5914g00001 401 Pfam Ribosomal protein L4/L1 family 23 263 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mupr5914g00001 401 MobiDBLite consensus disorder prediction 52 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5914g00001 Mupr-Chr5914 9309 10642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5914g00001 1 401 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 77.284 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5914g00001 K02930 - gmx:100796712 711.835