Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5909g00001 ATGGGGGATTTCATCTTCTCCTTCAAGACCCAAGAACATGCACACCAAAGAGCAAAACACAACAACAAGAAGAGGCTAACAGAAGACCAGGTTGCTATTCTTGAGAAGTGTTTTGCCTCTAACATGAAGCTGGAGCCGGAGCAGAAATTCCACCTTGCAAACCAACTTGGTGTGCCTCCAAGACAGGTTGCCATTTGGTACCAAAACAAAAGGGCTCGCTGGAAGAACCAGAGCCTGGAGGTGGACCATGGTGTGCTTCAGGCAAAGCTGGAGAATGTGATGGCTGAAAAGAAGCAGCTAGAGAAAGATGTGGAACGTCTCAAAGCAGAGCTGAAGAAGGCTCAAGAGATGCTGCTAATTGCTGGCAATGTCAAAGGTGCAGACCATAAGGGAGGGAACTCGGGGGTGCTTGATGATGCCACTCATCATGAGTGTTGGCAAAGTGGTGAGGTCATGCAGGTTGAGGAGCTTTATGCTTACTTTATGGGTGCAAATTATGGGTCAGGCTTGCATGAGAAAAGGGCATAA 528 0.4792 MGDFIFSFKTQEHAHQRAKHNNKKRLTEDQVAILEKCFASNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKNQSLEVDHGVLQAKLENVMAEKKQLEKDVERLKAELKKAQEMLLIAGNVKGADHKGGNSGVLDDATHHECWQSGEVMQVEELYAYFMGANYGSGLHEKRA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5909g00001 175 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 16 130 IPR045224 GO:0003700
Mupr5909g00001 175 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
Mupr5909g00001 175 Gene3D - 14 82 - -
Mupr5909g00001 175 CDD homeodomain 23 78 IPR001356 GO:0003677
Mupr5909g00001 175 ProSitePatterns 'Homeobox' domain signature. 52 75 IPR017970 GO:0000981|GO:0006355
Mupr5909g00001 175 Pfam Homeodomain 22 76 IPR001356 GO:0003677
Mupr5909g00001 175 Coils Coil 83 124 - -
Mupr5909g00001 175 FunFam Homeobox-leucine zipper protein ATHB-52 13 79 - -
Mupr5909g00001 175 SMART HOX_1 19 81 IPR001356 GO:0003677
Mupr5909g00001 175 SUPERFAMILY Homeodomain-like 11 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5909g00001 Mupr-Chr5909 12563 13135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5909g00001 21 169 Homeobox Transcription Factor Family AT5G53980 47.651 7.64e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr5909g00001 Homeodomain 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5909g00001 - - gsj:114378167 298.13