Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5903g00002 ATGCAAAAAACTTACACTTTCTCCTGCATGTCCTCTTGTGGAAGTGATCATAGTGGCTGCTTATTAGAATCTGATGAGGTTGATAAGGAAGAGTGGATTTCCCTCTCCCTTGGCCCTCCTAGCCAGGTCAAATCCAAAGCTGGTAATCCAAAACAGTACTCTTCTACTATGCGTGATGAGAAGCAAAACCCTACCTCTCATGATGACCTGAATGGTGTAACCGTTGCCCTTCACATTGGCCTTCCCACTACTGCTACCAAACCTTCTTCCACTCCAATTCACGGTCGATATTGGATCCCTACTCCTCAACAAATCCTTATTGGACCCACCCAGTTTTCTTGCACAGTCTGTAACAAAACGTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACACGGATCGCAGTATAGGAAAGGAGCGGAGTCATTGAGAGGGTCAAAAACAGGTTCTTCGATGCTGAGGGTTCCCTGCTATTGCTGTGAAGAGGGTTGCAAGAACAACATAAACTACCCAAGGTCGAGGCCACTGAAGGATTTCAGAACCCTGCAAACACACTACAAGAGGAAGCACGGAGGGAAGCCATTCGAGTGCAGGAAGTGTCACAAGGCATTTGCGGTGAGAGGGGATTGGAGAACACACGAGAAGAATTGCGGGAGGCTTTGGTTCTGCGTGTGTGGTTCTGATTTCAAGCATAAGAGGTCCCTTAAAGACCATGTCCGTGCATTCGGCAATGGCCATGCTCCCCACACCTTCAGTGGAGATGATGCTGCTAGTCAAGTGCTTCTTGTTACTTTCAAATAA 807 0.4734 MQKTYTFSCMSSCGSDHSGCLLESDEVDKEEWISLSLGPPSQVKSKAGNPKQYSSTMRDEKQNPTSHDDLNGVTVALHIGLPTTATKPSSTPIHGRYWIPTPQQILIGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGAESLRGSKTGSSMLRVPCYCCEEGCKNNINYPRSRPLKDFRTLQTHYKRKHGGKPFECRKCHKAFAVRGDWRTHEKNCGRLWFCVCGSDFKHKRSLKDHVRAFGNGHAPHTFSGDDAASQVLLVTFK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5903g00002 268 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Mupr5903g00002 268 SMART c2h2final6 112 134 IPR013087 -
Mupr5903g00002 268 SMART c2h2final6 160 192 IPR013087 -
Mupr5903g00002 268 SMART c2h2final6 197 217 IPR013087 -
Mupr5903g00002 268 Gene3D Classic Zinc Finger 136 221 - -
Mupr5903g00002 268 MobiDBLite consensus disorder prediction 35 67 - -
Mupr5903g00002 268 Gene3D Classic Zinc Finger 111 134 - -
Mupr5903g00002 268 MobiDBLite consensus disorder prediction 38 60 - -
Mupr5903g00002 268 FunFam Zinc finger protein WIP2 166 248 - -
Mupr5903g00002 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Mupr5903g00002 268 SUPERFAMILY beta-beta-alpha zinc fingers 112 217 IPR036236 -
Mupr5903g00002 268 PANTHER ZINC FINGER PROTEIN WIP2 24 253 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5903g00002 Mupr-Chr5903 9894 11363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5903g00002 30 254 C2H2 Transcription Factor Family AT1G13290 68.376 8.16e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr5903g00002 zf-C2H2_6 0.00061 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5903g00002 - - gmx:100784037 461.84