Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr589g00006 ATGGGTGTTTATGATCAAGTTTCTCTGCGGCCCTTGGATTCTTCTAGAAAGAGGAAAAGTAGGAGCAGAGGGGATGGGTCTAGATCCATAGCTGAGACCCTTGCAAAGTGGAAGGAATATAATGAGCATCTCAATTCTGGCAAAGATGATGGTAAGCCAACTCGTAAGGCGCCAGCTAAAGGTTCAAAGAAAGGGTGCATGAAGGGGAAGGGAGGACCTCAAAACTCTGAATGTAATTACAGAGGTGTGAGACAGAGGACGTGGGGGAAATGGGTTGGGGAGATTAGGGAGCCAAATAGAGGAAGTAGGCTTTGGTTGGGTACCTTCTCTACTGCCCAAGAAGCTGCTCTTGCCTATGATGAAGCTGCTAGAGCCATGTATGGTCCATGTGCACGCCTCAACTTTCCCGACATCTCAGATTATGCTTCTGTCAAGGAATCATTGAAGGACTCTTCAGTGGCTGCATCGTCATCTTGTTCTTCAGTGGCAACTGACACAACTACTACTTCCAATCAATCAGAGGTATGTGCTGGTGATGATGTTAAGGAGAAGATTCTGCCTGACAATGTAAACAATATAGTTAATGATTGTCACAAGGCTTATGAATCTACCTCGCCAACTAGTAGAATGAAGCAAGAACTGAAGGATGAGGCCACAGATCTCTCAGGTGAAATTCAAGATGTGAGACAAGGAGAAACACACGATGCTGGGAAGGTTGCAGAGGATGTAAATAAACAGATGGATTTTTCATGGATTGATGGCTTTGATTTTAGTGGCGATTACTTGAAGAGTTTTTCCATGGATGAGTTGTTCCAGGTGGATGAGCTTTTGGGGCATATAGATAATAACCCAATTGATGACTCTGGGTTGATGCAAGGTTTGGATTTTGGACAAATGAGTTTTCCTGGAGATAGTAATCCTCAGGTTGATCCGCCTTCAAGCTTTTTCTATGAGTTGCAAAATCCAGATGCCAAGTTGTTGGGAAGTTTGCCCCATATGGAGCAGACAGCATCAGGTGTTGATTATGGATTAGATTTCTTGAAAACAGTAGAGCCGGTGGACTATAATGGTGGAGGGGAAGAACCACGGTCATTTCGGAACAAGCGAATCATTTAG 1116 0.4418 MGVYDQVSLRPLDSSRKRKSRSRGDGSRSIAETLAKWKEYNEHLNSGKDDGKPTRKAPAKGSKKGCMKGKGGPQNSECNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFSTAQEAALAYDEAARAMYGPCARLNFPDISDYASVKESLKDSSVAASSSCSSVATDTTTTSNQSEVCAGDDVKEKILPDNVNNIVNDCHKAYESTSPTSRMKQELKDEATDLSGEIQDVRQGETHDAGKVAEDVNKQMDFSWIDGFDFSGDYLKSFSMDELFQVDELLGHIDNNPIDDSGLMQGLDFGQMSFPGDSNPQVDPPSSFFYELQNPDAKLLGSLPHMEQTASGVDYGLDFLKTVEPVDYNGGGEEPRSFRNKRII 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr589g00006 371 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Mupr589g00006 371 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Mupr589g00006 371 MobiDBLite consensus disorder prediction 299 313 - -
Mupr589g00006 371 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Mupr589g00006 371 FunFam Ethylene-responsive transcription factor 2 78 137 - -
Mupr589g00006 371 MobiDBLite consensus disorder prediction 291 313 - -
Mupr589g00006 371 SMART rav1_2 79 143 IPR001471 GO:0003700|GO:0006355
Mupr589g00006 371 MobiDBLite consensus disorder prediction 11 26 - -
Mupr589g00006 371 Coils Coil 211 231 - -
Mupr589g00006 371 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Mupr589g00006 371 CDD AP2 78 137 IPR001471 GO:0003700|GO:0006355
Mupr589g00006 371 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 15 336 - -
Mupr589g00006 371 Gene3D AP2/ERF domain 79 137 IPR036955 GO:0003700|GO:0006355
Mupr589g00006 371 MobiDBLite consensus disorder prediction 42 57 - -
Mupr589g00006 371 MobiDBLite consensus disorder prediction 42 79 - -
Mupr589g00006 371 Pfam AP2 domain 78 128 IPR001471 GO:0003700|GO:0006355
Mupr589g00006 371 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr589g00006 Mupr-Chr589 36466 38669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr589g00006 16 355 AP2-EREBP Transcription Factor Family AT2G40340 41.159 2.55e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr589g00006 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr589g00006 - K09286 gmx:100800134 545.814