Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5898g00005 ATGGAACTCAGTTTTAGGCACCAACTTGGCCTTGTTTGTGTCATATTGCTCTTCCCTGCGCTGTGTAACTGCAACCAATATTTCACCAACTCCAGAGCAACCTATTATGGTAGCCCTGATGGCTACGGGACTCCAAATGGAGCTTGTGGCTTTGGCGAATATGGAAGGACAATCAATAATGGCAGTGTCGCCGCAGTGTCTGGGCTATGGAGGAATGGAGCTGCCTGTGGTGCATGCTATCAGGTAAGGTGCAAAATACCGGAATACTGCGGTGTGAATGGAGCATACGTGGTGGTCACAGATTATGGTGCGGGAGACAGAACAGACTTCATTATGAGCCCACGCGCCTTCTCTAAATTGGGACGTAACAAAGCTGCATCTGCAGAGCTTAAGAAATACGGTACAGTGGATATTGAATACAAAAGGGTTCCCTGTACATACACCGGCAATGTCTTGTTCCATATCAAGGAAACTAGTTCCAACCCTGGTTATTTTGCTGTCGTCATTCTCAATGTAAATGGAAAATACGACATCACTGCTGTTGAAATGTGGCAGAAAAGGCAACAACGATGGGAGCCCCTGCGCAGGGCCTATGGGGCAGTGTTTGACTTTGCTAACCCACCCAGTGGTGAAATCCGTTTGAGGTTTCAAGTTGGCTTTAATTATTGGCTGTTACCAAAGATCCCCATCCCTGCTTATTGGAAGCCTGGTGCCACTTTTGACACCAAAGTTCAGCTTTATTAG 744 0.4691 MELSFRHQLGLVCVILLFPALCNCNQYFTNSRATYYGSPDGYGTPNGACGFGEYGRTINNGSVAAVSGLWRNGAACGACYQVRCKIPEYCGVNGAYVVVTDYGAGDRTDFIMSPRAFSKLGRNKAASAELKKYGTVDIEYKRVPCTYTGNVLFHIKETSSNPGYFAVVILNVNGKYDITAVEMWQKRQQRWEPLRRAYGAVFDFANPPSGEIRLRFQVGFNYWLLPKIPIPAYWKPGATFDTKVQLY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5898g00005 247 CDD DPBB_EXLB_N 29 145 - -
Mupr5898g00005 247 Gene3D - 20 146 IPR036908 -
Mupr5898g00005 247 Gene3D - 147 247 IPR036749 -
Mupr5898g00005 247 SUPERFAMILY Barwin-like endoglucanases 14 150 IPR036908 -
Mupr5898g00005 247 Pfam Expansin C-terminal domain 152 224 IPR007117 -
Mupr5898g00005 247 SUPERFAMILY PHL pollen allergen 150 241 IPR036749 -
Mupr5898g00005 247 PANTHER EXPANSIN-B3 17 245 - -
Mupr5898g00005 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Mupr5898g00005 247 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Mupr5898g00005 247 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Mupr5898g00005 247 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Mupr5898g00005 247 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576
Mupr5898g00005 247 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Mupr5898g00005 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 242 IPR007117 -
Mupr5898g00005 247 Pfam Lytic transglycolase 67 136 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5898g00005 Mupr-Chr5898 42479 43810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5898g00005 1 246 Expansin Gene Family AT4G17030 50.000 2.87e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5898g00005 - - gmx:100778424 419.853