Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5898g00002 ATGGGCAAGCAGGGGCCTTGCTATCACTGTGGAGTTGCAAGCACACCGCTTTGGCGTAATGGGCCACCTGAGAAGCCAGTACTATGCAATGCATGTGGATCCCGATGGAGGACAAAGGGAACACTTGCAAATTATACACCTTTGCATGCCCGGGCAGAAAATGTTGATTGTGAGGATCAAAAGGTTTCCAGGGTAAAAAGCATATCATTAAATAAGAACAAAGAAGTGAAATTGGTTAAACGAAAGCAGAACTGTGATAATGCTGCATCTGGAGGGTTTGTCCCTGATTATAATCAAGGATACCGAAAGGTTGTGGATGAAGATACAAGCAATAGATCAAGCTCAGGGTCAGCTGTCTCTAACTCAGAGAGCTGTGCTCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGTCCTGCTCAGTCAGTGGTATGGGATGCCACGGTGCCTTCAAAAAAGAGGACATGTGCAGGTCGTCCAAAGGCTTCTTCTGTTGAGAAGCTCACAAGAGACCTGTGTACAATTCTTCATGAACAACAGTCTTATTTTTCTGCATCTTCTGAAGAGGATCTTCTTTTCGAAAGTGATACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTCTATAGCCCGTGACGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAAACAATGCCTACTGAATGAGGCATATTCATGTTCTGGCACCATTCCTGTGCATAGTGATCGCAGTGGCATGAACTTCTCATTTCATGGAGTTGAAAAGAGCAGAAACTCCGCTGGCCAAATCATGCAACAAGAGCAACTTGGAAGGCATGTTTTCCCAAACCAGGACAAGTCTCAGCTTGAAAAACTGCAAACTTCTGGAAATCATGATTCACTGCTGTGCTTAATAGATTTAAATGATGTAGTGAACTATGAGGAGTTTATGAGAAATTTGACACCTGAAGAGCAGCAGCAATTACTGAAGTATCTCCCTGTGGTTGATACTGCCAAGTTTCCGGATAGCCTTAAAAACATGTTCAATAGCTTCCAATTCAAGGAGAACTTAACTTATTTTCAGCAACTTCTCGCGGAAGGTGTCTTTGATGTCTCTATGTTGGGGGAAGAACCTGAAGAATGGAAGACGACATTAGAAAGTCTTGTGTTATCTAATCTGTCAAAGTCAAAATGGAAATGTGAAAATAAAGCTGGAAAATCTATTGATCTGGGATCTACTGGTATGGAATCAAGTCGTGTTGCAAATACCAAGAGAATGCGCGACAGCCAAAATCAAAATTTTCCAGAATTGAAGGCAACAATGAGGAGCCCCAAAAGGGTGATAATAAAGGCTAGCTGTGAGGGCAAAGAAGTTGTAGAAGAAGGCTCTAGCTTCAGTCCAAAAAGCCTATTTGCTATACCCCATGGTGTTGGTGGTTTGCACTTGCTGGATTCTTTAAACTTTGTTGGTGAGAGTTCTGAGGATCTGCTGTTAGAGGTGCCTTCTAACAGTTCTTTTCCACAGGCAGAGCTCCTGCACCCGACATTAAGCTATGGTGCTCAGTTCAGCACCACTAGTAGTTCAGTTCACTCACCTGTTACTCATCCTTAA 1620 0.4315 MGKQGPCYHCGVASTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAENVDCEDQKVSRVKSISLNKNKEVKLVKRKQNCDNAASGGFVPDYNQGYRKVVDEDTSNRSSSGSAVSNSESCAQFGGTDASDLTGPAQSVVWDATVPSKKRTCAGRPKASSVEKLTRDLCTILHEQQSYFSASSEEDLLFESDTPMVSVEIGHGSILIRHPSSIARDEESEASSLSVDNKQCLLNEAYSCSGTIPVHSDRSGMNFSFHGVEKSRNSAGQIMQQEQLGRHVFPNQDKSQLEKLQTSGNHDSLLCLIDLNDVVNYEEFMRNLTPEEQQQLLKYLPVVDTAKFPDSLKNMFNSFQFKENLTYFQQLLAEGVFDVSMLGEEPEEWKTTLESLVLSNLSKSKWKCENKAGKSIDLGSTGMESSRVANTKRMRDSQNQNFPELKATMRSPKRVIIKASCEGKEVVEEGSSFSPKSLFAIPHGVGGLHLLDSLNFVGESSEDLLLEVPSNSSFPQAELLHPTLSYGAQFSTTSSSVHSPVTHP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5898g00002 539 Gene3D - 3 86 IPR013088 GO:0006355|GO:0008270
Mupr5898g00002 539 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Mupr5898g00002 539 MobiDBLite consensus disorder prediction 106 133 - -
Mupr5898g00002 539 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Mupr5898g00002 539 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 301 413 IPR044867 -
Mupr5898g00002 539 PANTHER OSJNBB0038F03.10 PROTEIN 1 520 IPR044589 -
Mupr5898g00002 539 Pfam Asx homology domain 299 381 IPR028020 -
Mupr5898g00002 539 Gene3D - 291 398 IPR038108 -
Mupr5898g00002 539 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Mupr5898g00002 539 MobiDBLite consensus disorder prediction 110 133 - -
Mupr5898g00002 539 CDD ZnF_GATA 6 55 IPR000679 GO:0006355|GO:0043565
Mupr5898g00002 539 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Mupr5898g00002 539 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5898g00002 Mupr-Chr5898 24776 30878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5898g00002 1 516 C2C2-Gata Transcription Factor Family AT4G17570 50.560 4.24e-143 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr5898g00002 ASXH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5898g00002 - - gmx:100799745 904.82