Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5896g00007 ATGGGGAGGAAGTGCTCACATTGTGGAACCATAGGCCATAATTCAAGGACTTGCACATCTTTGAGAGGGGCTACTTTCGTTGGACTTCGTCTCTTCGGCGTGCAACTAGACACGTGTGTTACCATCAAGAAAAGCTTTAGCATGGACTCCTTATTACCCTCATCATCATCATCTTCCTCCTTTTCTTCATCAAGAATAACCATCGATGAAAATTCTGACCGAACCTCTTTTGGGTATCTATCAGATGGTCTCATAGGTCGAGTCCAAGAGAGAAAGAAAGGAGTACCATGGACAGAAGAGGAACACCGAATATTCCTTGTTGGACTTGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCTAGAAACTTCGTGACTACAAGAACCCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTTTCTTCGACTGGCTACTATAAATAAGAAGAAACGACGTTCAAGTCTCTTTGACTTGGTTGGTAGCAACAACCCCAACACGGCAAGTTCTAATTCAGTTTCGGGTCATCAAGATGAGGAGTCTGAATGTGAAGTTAAGAATAACAATGGCACTACTTTGTCGTTGCTAGGGCGTATAACCTACTTTGAACAAGAAAGTCTAGACAATTTCTCTCATCAAGTTGCAGTTCCAAATCTGGACCTCACTCTTGCAGCTCCCAAGCCAAAGACACTGCAAGAACAAAACAAACCGTCCCCTTCTGCTCCATTCCTGCTTGGCCCAATTAGCGTCACTTAA 756 0.4431 MGRKCSHCGTIGHNSRTCTSLRGATFVGLRLFGVQLDTCVTIKKSFSMDSLLPSSSSSSSFSSSRITIDENSDRTSFGYLSDGLIGRVQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVGSNNPNTASSNSVSGHQDEESECEVKNNNGTTLSLLGRITYFEQESLDNFSHQVAVPNLDLTLAAPKPKTLQEQNKPSPSAPFLLGPISVT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5896g00007 251 Gene3D - 95 148 - -
Mupr5896g00007 251 SMART sant 93 143 IPR001005 -
Mupr5896g00007 251 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Mupr5896g00007 251 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
Mupr5896g00007 251 FunFam transcription factor MYB1R1 95 146 - -
Mupr5896g00007 251 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
Mupr5896g00007 251 MobiDBLite consensus disorder prediction 157 176 - -
Mupr5896g00007 251 NCBIfam myb-like DNA-binding domain, SHAQKYF class 92 143 IPR006447 GO:0003677
Mupr5896g00007 251 PANTHER TRANSCRIPTION FACTOR KUA1 3 212 - -
Mupr5896g00007 251 MobiDBLite consensus disorder prediction 229 251 - -
Mupr5896g00007 251 ProSiteProfiles SANT domain profile. 97 145 IPR017884 -
Mupr5896g00007 251 MobiDBLite consensus disorder prediction 157 186 - -
Mupr5896g00007 251 CDD SANT 96 141 IPR001005 -
Mupr5896g00007 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5896g00007 Mupr-Chr5896 49728 50879 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr5896g00007 Myb_DNA-binding 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5896g00007 - - gmx:778052 387.497